Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1476
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.51 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   4.7  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   6.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   6.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.3  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   8.3  
AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    23   8.3  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = +1

Query: 28  EHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKH----GGGLVLEDDRHNIE 195
           +H  P+P  +  + S LL H L       N   +H    H H    GGG      RH+  
Sbjct: 382 DHIPPLPPTIAFDPSVLLDHHLLDSSESLNTCRLHGSPTHLHNHRSGGG-----GRHHHH 436

Query: 196 HH 201
           HH
Sbjct: 437 HH 438


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   QISPVDQVRTLPPRSCVREEG 65
           QI+P  + RT+PP+ C  ++G
Sbjct: 549 QINP--RARTMPPKGCSHDDG 567


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 25  FEHFHPVPVYVKKEHSHLLKHPLEKG 102
           F HF+    Y+ ++H  L  H L  G
Sbjct: 94  FRHFYDRGGYINRQHDPLSGHMLNSG 119


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 608 KCLFELFRIPVPDLDLIQK 664
           KCL     +PVPDL  +QK
Sbjct: 320 KCLIGECWVPVPDLPKVQK 338


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
 Frame = -3

Query: 423 FSVVMTVVLWLLKFSVSLQAFASFIAFEATR*VLITSLLE---TTMLIASVFQTSMLQTL 253
           F  + T+ + L  +S+  Q +   +       V+I S+ E   T+  I      S+L+ +
Sbjct: 524 FVALFTMEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTSTQIMPPLGVSVLRCV 583

Query: 252 FQTAVFKASVLKTSRSNMVFNVVSVVLEDKSTAVLVF 142
               VFK +    S SN+V ++++ +    S  +L+F
Sbjct: 584 RLLRVFKVTKYWQSLSNLVASLLNSIQSIASLLLLLF 620


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 738 CEIRCYVFKMSVDFLDR 788
           CE RC +FK+++   DR
Sbjct: 90  CEARCGLFKINMTMTDR 106


>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 4   KSHQSIKFEHFHPVPVYVKKE 66
           +  + IKFE F P+   VKKE
Sbjct: 58  RGEKKIKFEEFLPIFSQVKKE 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,809
Number of Sequences: 2352
Number of extensions: 12000
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)