Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1476
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-188|AAF45612.1|  151|Drosophila melanogaster CG14770-PA...    91   2e-18
AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB...    33   0.34 
AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA...    33   0.34 
BT003288-1|AAO25047.1|  422|Drosophila melanogaster GM06145p pro...    31   1.4  
AE014297-3868|AAN14064.1|  417|Drosophila melanogaster CG17370-P...    31   1.4  
AE014297-3867|AAF56522.1|  417|Drosophila melanogaster CG17370-P...    31   1.4  
AE014297-3866|AAF56521.1|  417|Drosophila melanogaster CG17370-P...    31   1.4  
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr...    30   3.2  
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P...    30   3.2  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   5.6  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   5.6  
M35887-1|AAA28446.1| 1123|Drosophila melanogaster defective chor...    29   9.7  
AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p pro...    29   9.7  
AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1 ...    29   9.7  
AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB...    29   9.7  
AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA...    29   9.7  

>AE014298-188|AAF45612.1|  151|Drosophila melanogaster CG14770-PA
           protein.
          Length = 151

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = +1

Query: 1   AKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDD 180
           A SHQS+KF H+H VPVY+KKE  HL+K P+E G ++Q LK++HP++EH H  GLVLE+ 
Sbjct: 65  ATSHQSVKFHHYHAVPVYIKKEDQHLVKKPIEIGGTKQKLKILHPKSEHNHNHGLVLEN- 123

Query: 181 RHNIEHH 201
            H+  HH
Sbjct: 124 -HSESHH 129


>AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB,
           isoform B protein.
          Length = 783

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +1

Query: 16  SIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHP--ETEHKHGGGLVLEDDRHN 189
           S+  +HFH   + +K   +H  +  LE      N +L+ P  + +H H GG +++ +RH+
Sbjct: 52  SLPKKHFHRTSLLIKA-FNHKFRLDLEL-----NSQLLSPNIQQKHYHVGGYLVDGNRHD 105

Query: 190 IEH 198
           IEH
Sbjct: 106 IEH 108


>AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA,
           isoform A protein.
          Length = 840

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +1

Query: 16  SIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHP--ETEHKHGGGLVLEDDRHN 189
           S+  +HFH   + +K   +H  +  LE      N +L+ P  + +H H GG +++ +RH+
Sbjct: 52  SLPKKHFHRTSLLIKA-FNHKFRLDLEL-----NSQLLSPNIQQKHYHVGGYLVDGNRHD 105

Query: 190 IEH 198
           IEH
Sbjct: 106 IEH 108


>BT003288-1|AAO25047.1|  422|Drosophila melanogaster GM06145p
           protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = -3

Query: 435 SLSVFSVVMTVVLWLLKFSVSLQAFASFIAFEATR*VLITSLLETTMLIASVFQTSMLQT 256
           S+S+  + +    WLL  ++ +    +FIAF     + +++LL T +LI  VF   +   
Sbjct: 191 SVSIVCIWVLTGHWLLMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSY 250

Query: 255 LFQTAV 238
           +F T V
Sbjct: 251 IFSTNV 256


>AE014297-3868|AAN14064.1|  417|Drosophila melanogaster CG17370-PC,
           isoform C protein.
          Length = 417

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = -3

Query: 435 SLSVFSVVMTVVLWLLKFSVSLQAFASFIAFEATR*VLITSLLETTMLIASVFQTSMLQT 256
           S+S+  + +    WLL  ++ +    +FIAF     + +++LL T +LI  VF   +   
Sbjct: 186 SVSIVCIWVLTGHWLLMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSY 245

Query: 255 LFQTAV 238
           +F T V
Sbjct: 246 IFSTNV 251


>AE014297-3867|AAF56522.1|  417|Drosophila melanogaster CG17370-PB,
           isoform B protein.
          Length = 417

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = -3

Query: 435 SLSVFSVVMTVVLWLLKFSVSLQAFASFIAFEATR*VLITSLLETTMLIASVFQTSMLQT 256
           S+S+  + +    WLL  ++ +    +FIAF     + +++LL T +LI  VF   +   
Sbjct: 186 SVSIVCIWVLTGHWLLMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSY 245

Query: 255 LFQTAV 238
           +F T V
Sbjct: 246 IFSTNV 251


>AE014297-3866|AAF56521.1|  417|Drosophila melanogaster CG17370-PA,
           isoform A protein.
          Length = 417

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = -3

Query: 435 SLSVFSVVMTVVLWLLKFSVSLQAFASFIAFEATR*VLITSLLETTMLIASVFQTSMLQT 256
           S+S+  + +    WLL  ++ +    +FIAF     + +++LL T +LI  VF   +   
Sbjct: 186 SVSIVCIWVLTGHWLLMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSY 245

Query: 255 LFQTAV 238
           +F T V
Sbjct: 246 IFSTNV 251


>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
           protein.
          Length = 2175

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 14/62 (22%), Positives = 25/62 (40%)
 Frame = +1

Query: 13  QSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNI 192
           Q  + +  H    ++ ++H H L+     G +       H    H HG GL+     H++
Sbjct: 674 QQHQHQQQHHQQQHLHQQHHHHLQQQPNSGSNSNPASNDHHHGHHLHGHGLLHPSSAHHL 733

Query: 193 EH 198
            H
Sbjct: 734 HH 735


>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
           isoform A protein.
          Length = 2175

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 14/62 (22%), Positives = 25/62 (40%)
 Frame = +1

Query: 13  QSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNI 192
           Q  + +  H    ++ ++H H L+     G +       H    H HG GL+     H++
Sbjct: 674 QQHQHQQQHHQQQHLHQQHHHHLQQQPNSGSNSNPASNDHHHGHHLHGHGLLHPSSAHHL 733

Query: 193 EH 198
            H
Sbjct: 734 HH 735


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 9    SPVDQVRTLPPRSCVREEGAQP--PSQAPS*KGKIRAKPQADSPRD 140
            SP + ++ +     +RE+  QP  PSQA S +  I    +A SPRD
Sbjct: 2219 SPKEVLQPVSMTETIREDADQPMKPSQAESRRESIAESIKASSPRD 2264


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 9    SPVDQVRTLPPRSCVREEGAQP--PSQAPS*KGKIRAKPQADSPRD 140
            SP + ++ +     +RE+  QP  PSQA S +  I    +A SPRD
Sbjct: 2412 SPKEVLQPVSMTETIREDADQPMKPSQAESRRESIAESIKASSPRD 2457


>M35887-1|AAA28446.1| 1123|Drosophila melanogaster defective chorion-1
            fc125 proteinprecursor protein.
          Length = 1123

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +1

Query: 88   PLEKGKSEQNLKLIHPETEHKHGGG---LVLEDDRHNIEHHIASAGLEHG 228
            P+E+     N K   P      GGG     L D RH  + HI   G +HG
Sbjct: 1025 PVERPDDPWNQKPYDPHHPLYTGGGSYDAYLRDGRHRRDTHIMGQGTQHG 1074


>AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p
           protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +1

Query: 31  HFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGG 162
           H  P P      HSH L  P   G S  +L      T H H GG
Sbjct: 255 HLAP-PSPTTHHHSHSLASPTPSGSSGSSLSPRENGTSHSHHGG 297


>AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1
           protein.
          Length = 526

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +1

Query: 31  HFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGG 162
           H  P P      HSH L  P   G S  +L      T H H GG
Sbjct: 173 HLAP-PSPTTHHHSHSLASPTPSGSSGSSLSPRENGTSHSHHGG 215


>AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB,
            isoform B protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +1

Query: 88   PLEKGKSEQNLKLIHPETEHKHGGG---LVLEDDRHNIEHHIASAGLEHG 228
            P+E+     N K   P      GGG     L D RH  + HI   G +HG
Sbjct: 1025 PVERPDDPWNQKPYDPHHPLYTGGGSYDAYLRDGRHRRDTHIMGQGTQHG 1074


>AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA
           protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +1

Query: 31  HFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGG 162
           H  P P      HSH L  P   G S  +L      T H H GG
Sbjct: 255 HLAP-PSPTTHHHSHSLASPTPSGSSGSSLSPRENGTSHSHHGG 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,545,727
Number of Sequences: 53049
Number of extensions: 568312
Number of successful extensions: 2036
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)