Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1475
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001024-1|AAH01024.1|  549|Homo sapiens guanine nucleotide bind...    32   2.0  
AY825265-1|AAV74413.1|  549|Homo sapiens nucleostemin protein.         32   2.0  
AK027516-1|BAB55169.1|  549|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AK027514-1|BAB55168.1|  537|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AF191018-1|AAF09482.1|  560|Homo sapiens E2IG3 protein.                32   2.0  

>BC001024-1|AAH01024.1|  549|Homo sapiens guanine nucleotide binding
           protein-like 3 (nucleolar) protein.
          Length = 549

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 680 PTVRFQRSFLPRT---IRLWNELAYTVFPVRYDLTFFKRGLWRVLKGRQQLCSAPAIAAV 510
           PTV F+ S  P+    I    +      P R ++ F K GLW++L G Q+ CS      V
Sbjct: 200 PTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGV 259

Query: 509 HG 504
            G
Sbjct: 260 IG 261


>AY825265-1|AAV74413.1|  549|Homo sapiens nucleostemin protein.
          Length = 549

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 680 PTVRFQRSFLPRT---IRLWNELAYTVFPVRYDLTFFKRGLWRVLKGRQQLCSAPAIAAV 510
           PTV F+ S  P+    I    +      P R ++ F K GLW++L G Q+ CS      V
Sbjct: 200 PTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGV 259

Query: 509 HG 504
            G
Sbjct: 260 IG 261


>AK027516-1|BAB55169.1|  549|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14610 fis, clone NT2RP1000958, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 549

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 680 PTVRFQRSFLPRT---IRLWNELAYTVFPVRYDLTFFKRGLWRVLKGRQQLCSAPAIAAV 510
           PTV F+ S  P+    I    +      P R ++ F K GLW++L G Q+ CS      V
Sbjct: 200 PTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGV 259

Query: 509 HG 504
            G
Sbjct: 260 IG 261


>AK027514-1|BAB55168.1|  537|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14608 fis, clone NT2RP1000915, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 537

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 680 PTVRFQRSFLPRT---IRLWNELAYTVFPVRYDLTFFKRGLWRVLKGRQQLCSAPAIAAV 510
           PTV F+ S  P+    I    +      P R ++ F K GLW++L G Q+ CS      V
Sbjct: 188 PTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGV 247

Query: 509 HG 504
            G
Sbjct: 248 IG 249


>AF191018-1|AAF09482.1|  560|Homo sapiens E2IG3 protein.
          Length = 560

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 680 PTVRFQRSFLPRT---IRLWNELAYTVFPVRYDLTFFKRGLWRVLKGRQQLCSAPAIAAV 510
           PTV F+ S  P+    I    +      P R ++ F K GLW++L G Q+ CS      V
Sbjct: 200 PTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGV 259

Query: 509 HG 504
            G
Sbjct: 260 IG 261


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,287,289
Number of Sequences: 237096
Number of extensions: 2219786
Number of successful extensions: 4276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4276
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)