Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1472
(366 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 26 0.38
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 26 0.38
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 25 0.67
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 1.6
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 23 2.7
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 22 6.3
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 22 6.3
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 22 6.3
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 22 8.3
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 22 8.3
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 22 8.3
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 26.2 bits (55), Expect = 0.38
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 279 PECHPCIQDDCQVLDLPGPRY 217
P CHP I C++L PRY
Sbjct: 438 PSCHPPIDHVCELLPRLQPRY 458
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.2 bits (55), Expect = 0.38
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +1
Query: 196 ITLLGESIPWARKVKYLAVILDAWMTFRLDIKSVRDRAXLILGRL 330
+ + G + R ++YL V+L +++R ++ V D+A ++ L
Sbjct: 727 VNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRAL 771
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 25.4 bits (53), Expect = 0.67
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 199 TLLGESIPWARKVKYLAVILDAWMTFRLDIKSVRDRAXLILG 324
TL S+ ++ L +ILD+ + F+L + V +A LG
Sbjct: 761 TLSNSSLSRVLSIRDLGIILDSRLNFKLQLDEVLLKANRTLG 802
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 211 ESIPWARKVKYLAVILDAWMTFRLDIK 291
E I R +KYL VI+D ++FR ++
Sbjct: 697 ERIESIRHLKYLGVIIDDRLSFRKHVE 723
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 23.4 bits (48), Expect = 2.7
Identities = 6/30 (20%), Positives = 20/30 (66%)
Frame = +1
Query: 37 VSVEQVIGTSSSVLVVPYRKVIVMQTSIYW 126
V++++ T ++++VP ++++ S++W
Sbjct: 237 VTLQRQSDTHRAIVIVPALVIMILALSVFW 266
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.2 bits (45), Expect = 6.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 208 GESIPWARKVKYLAVILDAWMTFRLDIKSVRDRAXLILG 324
G ++ K L V+LD+ + F+ I V R +LG
Sbjct: 835 GTAVNRQNHAKDLGVLLDSSLNFKQHIDDVVARGNQLLG 873
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 22.2 bits (45), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -1
Query: 186 LPTTVDYCQTSR--AGSRYALP 127
LPT DY +T R AG YA P
Sbjct: 1228 LPTRPDYARTYRAAAGQDYAPP 1249
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 134 AYREPARLV*Q*STVVGNCP*SPS*ANQYLGPGRSSTWQSSW 259
AY P+ V + ++ N + S +++++ G + W SSW
Sbjct: 88 AYAPPSWTVQEFEELLDNIVLTVSGSSKFVVAGDFNAWSSSW 129
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 189 APDHPLRRINTLGQEGQVPGSHPG 260
A H L ++ + PGSHPG
Sbjct: 814 AGSHHLHHLHHHAAQQPPPGSHPG 837
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 21.8 bits (44), Expect = 8.3
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 230 GRSSTWQSSWMHG*HS 277
G+ +TW+ +HG H+
Sbjct: 946 GKGATWKQKELHGTHT 961
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 21.8 bits (44), Expect = 8.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 226 ARKVKYLAVILDAWMTFRLDIKSVRDRAXLILGRLYPMI 342
+R +KYL ++LD + + I+ +RA + L M+
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMM 744
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,145
Number of Sequences: 2352
Number of extensions: 7275
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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