Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1472
(366 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein. 28 8.0
U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein. 28 8.0
BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein. 28 8.0
BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein. 28 8.0
BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein. 28 8.0
BC022898-1|AAH22898.1| 195|Homo sapiens COMM domain containing ... 28 8.0
BC006531-1|AAH06531.2| 807|Homo sapiens NOMO3 protein protein. 28 8.0
AY542159-1|AAS22241.1| 195|Homo sapiens COMMD3 protein. 28 8.0
AL158211-5|CAI15953.1| 148|Homo sapiens COMM domain containing ... 28 8.0
AL158211-3|CAI15951.1| 195|Homo sapiens COMM domain containing ... 28 8.0
AL158211-2|CAI15950.1| 162|Homo sapiens COMM domain containing ... 28 8.0
AK097109-1|BAC04953.1| 129|Homo sapiens protein ( Homo sapiens ... 28 8.0
AK023372-1|BAB14547.1| 159|Homo sapiens protein ( Homo sapiens ... 28 8.0
AF201948-1|AAF17240.1| 195|Homo sapiens PIL protein protein. 28 8.0
>X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.
Length = 1190
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 198 DQGQLPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
D+ Q P + D+ +R+G + + P + L +Y ++ + + P L + HGK
Sbjct: 711 DELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGK 766
>U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.
Length = 1148
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 198 DQGQLPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
D+ Q P + D+ +R+G + + P + L +Y ++ + + P L + HGK
Sbjct: 743 DELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGK 798
>BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.
Length = 1222
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 198 DQGQLPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
D+ Q P + D+ +R+G + + P + L +Y ++ + + P L + HGK
Sbjct: 743 DELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGK 798
>BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.
Length = 1222
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 198 DQGQLPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
D+ Q P + D+ +R+G + + P + L +Y ++ + + P L + HGK
Sbjct: 743 DELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGK 798
>BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.
Length = 1100
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 198 DQGQLPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
D+ Q P + D+ +R+G + + P + L +Y ++ + + P L + HGK
Sbjct: 576 DELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGK 631
>BC022898-1|AAH22898.1| 195|Homo sapiens COMM domain containing 3
protein.
Length = 195
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 338 IG*SLPRINXARSRTDFMSSRNVIHASRMTARYLTFLAQGIDSP 207
IG SLP I R ++ N +H A +T Q DSP
Sbjct: 118 IGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSP 161
>BC006531-1|AAH06531.2| 807|Homo sapiens NOMO3 protein protein.
Length = 807
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 198 DQGQLPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
D+ Q P + D+ +R+G + + P + L +Y ++ + + P L + HGK
Sbjct: 328 DELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGK 383
>AY542159-1|AAS22241.1| 195|Homo sapiens COMMD3 protein.
Length = 195
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 338 IG*SLPRINXARSRTDFMSSRNVIHASRMTARYLTFLAQGIDSP 207
IG SLP I R ++ N +H A +T Q DSP
Sbjct: 118 IGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSP 161
>AL158211-5|CAI15953.1| 148|Homo sapiens COMM domain containing 3
protein.
Length = 148
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 338 IG*SLPRINXARSRTDFMSSRNVIHASRMTARYLTFLAQGIDSP 207
IG SLP I R ++ N +H A +T Q DSP
Sbjct: 71 IGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSP 114
>AL158211-3|CAI15951.1| 195|Homo sapiens COMM domain containing 3
protein.
Length = 195
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 338 IG*SLPRINXARSRTDFMSSRNVIHASRMTARYLTFLAQGIDSP 207
IG SLP I R ++ N +H A +T Q DSP
Sbjct: 118 IGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSP 161
>AL158211-2|CAI15950.1| 162|Homo sapiens COMM domain containing 3
protein.
Length = 162
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 338 IG*SLPRINXARSRTDFMSSRNVIHASRMTARYLTFLAQGIDSP 207
IG SLP I R ++ N +H A +T Q DSP
Sbjct: 85 IGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSP 128
>AK097109-1|BAC04953.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ39790 fis, clone SPLEN2003204. ).
Length = 129
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 186 LPTTVDYCQTSRAGSRYALPPVNAGLHYYYL 94
LP+ VD T S Y LPP N HY+ L
Sbjct: 85 LPSPVDCTPTVILASSYPLPPPNQRSHYHPL 115
>AK023372-1|BAB14547.1| 159|Homo sapiens protein ( Homo sapiens
cDNA FLJ13310 fis, clone OVARC1001453. ).
Length = 159
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 309 GAVADRFYVQPECHPCIQDDC-QVLDLPGPR 220
G A Y++P C C+ + C Q L LP PR
Sbjct: 54 GLHAQSLYIRPVCQTCVSNLCVQGLCLPRPR 84
>AF201948-1|AAF17240.1| 195|Homo sapiens PIL protein protein.
Length = 195
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 338 IG*SLPRINXARSRTDFMSSRNVIHASRMTARYLTFLAQGIDSP 207
IG SLP I R ++ N +H A +T Q DSP
Sbjct: 118 IGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSP 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,841,219
Number of Sequences: 237096
Number of extensions: 1216742
Number of successful extensions: 2330
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2330
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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