Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1472
(366 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 41 4e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 41 4e-04
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 34 0.050
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 34 0.050
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 33 0.15
AY061330-1|AAL28878.1| 894|Drosophila melanogaster LD25692p pro... 29 1.4
AE014134-3048|AAF53766.1| 894|Drosophila melanogaster CG10689-P... 29 1.4
AY069388-1|AAL39533.1| 415|Drosophila melanogaster LD09732p pro... 27 7.5
AJ009657-1|CAA08768.1| 415|Drosophila melanogaster Mu3 subunit ... 27 7.5
AF110233-1|AAF14249.1| 415|Drosophila melanogaster clathrin-ass... 27 7.5
AE014298-989|AAF46231.1| 415|Drosophila melanogaster CG3035-PA ... 27 7.5
AE014134-3579|AAF57251.1| 439|Drosophila melanogaster CG15216-P... 27 10.0
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 196 ITLLGESIPWARKVKYLAVILDAWMTFRLDIKSVRDRAXLILGRLYPMI*KGSKMSL 366
+ +L I W ++YL +I D +TF+ I + + I+ LYP+I + SK+S+
Sbjct: 757 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSI 813
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 196 ITLLGESIPWARKVKYLAVILDAWMTFRLDIKSVRDRAXLILGRLYPMI*KGSKMSL 366
+ +L I W ++YL +I D +TF+ I + + I+ LYP+I + SK+S+
Sbjct: 705 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSI 761
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +1
Query: 124 WW*GISRARTASLTVVNCSWQLPLITLLGESIPWARKVKYLAVILDAWMTFRLDIKSVRD 303
W I+ + A++T N + P ++L G I + KYL + LD +TF I +++
Sbjct: 713 WNVRINAEKCANVTFANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQ 772
Query: 304 RAXLILGRLYPMI*KGSKMSL 366
+ R+ +I +K+SL
Sbjct: 773 AFRTKVARMSWLIAPRNKLSL 793
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +1
Query: 124 WW*GISRARTASLTVVNCSWQLPLITLLGESIPWARKVKYLAVILDAWMTFRLDIKSVRD 303
W I+ + A++T N + P ++L G I + KYL + LD +TF I +++
Sbjct: 515 WNVRINAEKCANVTFANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQ 574
Query: 304 RAXLILGRLYPMI*KGSKMSL 366
+ R+ +I +K+SL
Sbjct: 575 AFRTKVARMSWLIAPRNKLSL 595
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 217 IPWARKVKYLAVILDAWMTFRLDIKSVRDRAXLILGRLYPMI*KGSKMSL 366
+P KYL V+LD +TF + +R R + + Y ++ SK+SL
Sbjct: 739 VPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSL 788
>AY061330-1|AAL28878.1| 894|Drosophila melanogaster LD25692p
protein.
Length = 894
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 186 LPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPN-DLFD 43
LP TV+ + + AG Y + ++ G HY T+++NQ PN LF+
Sbjct: 786 LPETVNVRKAATAGYFYHVARLSKGGHYK--TIKHNQTVMIHPNSSLFE 832
>AE014134-3048|AAF53766.1| 894|Drosophila melanogaster CG10689-PA
protein.
Length = 894
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 186 LPTTVDYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPN-DLFD 43
LP TV+ + + AG Y + ++ G HY T+++NQ PN LF+
Sbjct: 786 LPETVNVRKAATAGYFYHVARLSKGGHYK--TIKHNQTVMIHPNSSLFE 832
>AY069388-1|AAL39533.1| 415|Drosophila melanogaster LD09732p
protein.
Length = 415
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 171 DYCQTSRAGSRYALPPVNAGLHYYYLTVR 85
+Y ++ + Y +PPV A HYY +TV+
Sbjct: 30 EYFLDAQRAAPYDVPPVIATPHYYLITVQ 58
>AJ009657-1|CAA08768.1| 415|Drosophila melanogaster Mu3 subunit of
clathrin-associatedprotein complex AP-3 protein.
Length = 415
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 171 DYCQTSRAGSRYALPPVNAGLHYYYLTVR 85
+Y ++ + Y +PPV A HYY +TV+
Sbjct: 30 EYFLDAQRAAPYDVPPVIATPHYYLITVQ 58
>AF110233-1|AAF14249.1| 415|Drosophila melanogaster
clathrin-associated adaptor complexAP-3 medium chain
protein.
Length = 415
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 171 DYCQTSRAGSRYALPPVNAGLHYYYLTVR 85
+Y ++ + Y +PPV A HYY +TV+
Sbjct: 30 EYFLDAQRAAPYDVPPVIATPHYYLITVQ 58
>AE014298-989|AAF46231.1| 415|Drosophila melanogaster CG3035-PA
protein.
Length = 415
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 171 DYCQTSRAGSRYALPPVNAGLHYYYLTVR 85
+Y ++ + Y +PPV A HYY +TV+
Sbjct: 30 EYFLDAQRAAPYDVPPVIATPHYYLITVQ 58
>AE014134-3579|AAF57251.1| 439|Drosophila melanogaster CG15216-PA
protein.
Length = 439
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 33 SRECRTSHWDEQQRSGC 83
SRECR +HW E+ R C
Sbjct: 135 SRECRRAHW-EKHRKAC 150
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,758,349
Number of Sequences: 53049
Number of extensions: 372724
Number of successful extensions: 1074
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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