Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1472
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.16 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   0.49 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   2.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   3.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   4.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   4.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -1

Query: 171  DYCQTSRAGSRYALPPVNAGLHYYYLTVRYNQNAAARPNDLFDTHGK 31
            D  Q S    +Y L  +  G  Y      YN      P+D+ +T  K
Sbjct: 1411 DTAQISSTVQKYTLENLLCGSRYQIYVTAYNGIGTGDPSDMLNTRTK 1457


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 166 LSN*PCGLAICPTTSKCWFALLLPYG 89
           L N  CG+A+ P T+  +++ L  +G
Sbjct: 247 LKNGICGMALSPVTNNLYYSPLASHG 272


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 186  LPTTVDYCQT 157
            +PTTV YCQT
Sbjct: 1200 VPTTVTYCQT 1209


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 186  LPTTVDYCQT 157
            +PTTV YCQT
Sbjct: 1196 VPTTVTYCQT 1205


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 187 IANYS*LLSN*PCGLAICPTTSKCWFALLLPYG 89
           +A  S  + N   G+A+ P T+  +++ LL +G
Sbjct: 245 VAGESFTVKNGIYGIALSPVTNNLYYSPLLSHG 277


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 355 YSPFKS*DKVSRELTRRGRGQI 290
           +SP +  + V +   RR RGQ+
Sbjct: 378 FSPHEENESVDKHPNRRARGQL 399


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 192 PDHPLRRINTLGQEGQVPGSHPG 260
           PD  +RR  T+G + +  GS  G
Sbjct: 767 PDKNIRRKVTMGDKSKKQGSSAG 789


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 192 PDHPLRRINTLGQEGQVPGSHPG 260
           PD  +RR  T+G + +  GS  G
Sbjct: 857 PDKNIRRKVTMGDKSKKQGSSAG 879


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,694
Number of Sequences: 438
Number of extensions: 2221
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)