Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1468
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 39 0.004
07_01_0056 + 428297-428332,428574-430127,430209-430274 35 0.063
11_06_0549 + 24868344-24868930,24869740-24869957,24870018-248701... 33 0.25
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592... 33 0.25
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543... 33 0.25
12_02_0701 + 22271550-22271652,22272310-22272791,22272823-22272927 31 0.58
09_06_0015 - 20234231-20234344,20234846-20234902,20234968-202351... 31 0.58
02_03_0080 + 14935664-14935796,14943858-14944175,14944352-149451... 30 1.8
04_03_0584 + 17546945-17547382 29 2.4
04_03_0583 + 17539541-17539978 29 2.4
12_02_0632 + 21379548-21379886 29 4.1
08_02_0411 + 16855255-16855644 29 4.1
08_02_0410 - 16842306-16842950,16844994-16845182 28 5.4
05_05_0394 - 24638466-24638723,24638849-24638914,24639437-246394... 28 5.4
02_04_0379 - 22491069-22491503 28 5.4
01_06_1557 - 38231826-38233391 28 5.4
05_07_0114 - 27769593-27770267 28 7.2
09_02_0170 - 5273607-5273929,5274272-5274350,5274627-5274629 27 9.5
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +3
Query: 258 ASRPTPSHVAELQQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVS 437
AS S AE QQLR + S+ + ++ + L+ ++LLE+ S
Sbjct: 231 ASEALRSMDAERQQLRTVNSKLRTNLDEARVALEARNNVLEKLRQSMFEKEQLLEQTQAS 290
Query: 438 GKEKEERHQQAIKQLEEKHSKAIENLKSE 524
+ EE+ +I +L KH K +E+L+++
Sbjct: 291 LQSAEEKRNASIAELTAKHQKQLESLEAQ 319
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +3
Query: 288 ELQQLRGLASEQQRSVQSLTLQLQ----RXXXXXXXXXXXXHRLKELLERETVSGKEKE- 452
EL++ R ASE RS+ + QL+ + +LE+ S EKE
Sbjct: 223 ELERARQQASEALRSMDAERQQLRTVNSKLRTNLDEARVALEARNNVLEKLRQSMFEKEQ 282
Query: 453 --ERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHAERTE 587
E+ Q +++ EEK + +I L ++H + + AERT+
Sbjct: 283 LLEQTQASLQSAEEKRNASIAELTAKHQKQLESLEAQLTEVSAERTK 329
>07_01_0056 + 428297-428332,428574-430127,430209-430274
Length = 551
Score = 34.7 bits (76), Expect = 0.063
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 11/141 (7%)
Frame = +1
Query: 118 RSDLKPPRGRRGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSS 297
R +P + RRG + S R S R K+ + K K SPSSS
Sbjct: 24 RGKQRPKQRRRGRCSSTSSRSESPPRKRSKKLKVSDKKSTKNKGRRRHHSLSPSPSPSSS 83
Query: 298 SCGAWLRSSSG------PFSL*PCSCRGRRRXKRLSNSRPID*KSCWRERRS-----AGK 444
S RSSSG S+ P R ++ R D K R RRS +G+
Sbjct: 84 SVSYSTRSSSGGGGGASERSVSPPRRSRSRDVRKKKKERGRDSKRVRRSRRSTSYSTSGE 143
Query: 445 KKKNAISRQSNN*KRSTVRRS 507
++ SR +N +S R+S
Sbjct: 144 SNSSSRSRSRSNNSKSRNRKS 164
>11_06_0549 +
24868344-24868930,24869740-24869957,24870018-24870175,
24870202-24870633,24870717-24871064
Length = 580
Score = 32.7 bits (71), Expect = 0.25
Identities = 38/139 (27%), Positives = 52/139 (37%)
Frame = +2
Query: 101 AAGSRGGQISSRREGGEDARRLRVEDEGA*KEGQRSREI*KRAHRGSGKTEGGIATDSVX 280
A+ ++G R E GE ++RL E EGA G R ++ RG G E T +
Sbjct: 19 ASPAKGVTPERRGERGEASQRLGSEREGATAAGDGVRRW-RQWWRGEGAEERAATTAAPG 77
Query: 281 XXXXXXXXXXXXXXXXVRSVSNLAAAEGGDXGRDSQTRGP*TERAVGERDGQRERKRRTP 460
AEG D RG RAV G RER RR P
Sbjct: 78 GRSTVLPSSLSRGEKKGDGGKGRVTAEGDGLAGD---RGDDDARAVRHGSGLRERGRRRP 134
Query: 461 SAGNQTIRREAQ*GDRKSQ 517
+ + + + G+R+ Q
Sbjct: 135 ESPSGVLSGD---GERQEQ 150
>08_02_1473 -
27358162-27358275,27358968-27359024,27359102-27359245,
27359770-27359934,27360020-27360208,27360301-27360535,
27360826-27360932,27361020-27361103,27361185-27361695,
27361793-27361854,27363373-27363456
Length = 583
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 309 LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAIKQLEE 488
L EQQ +L+ R RL+ ERE K+K+E ++ KQLEE
Sbjct: 419 LLREQQDDEYLASLEADREKELKAEQEAELRRLEAAAEREAAIAKQKQEEEEKRRKQLEE 478
Query: 489 K 491
+
Sbjct: 479 E 479
>04_03_0535 -
16850704-16853001,16854055-16854115,16854228-16854323,
16854394-16854521,16855016-16855067,16855182-16855274,
16855473-16855590,16856456-16856609,16857512-16857643,
16859136-16859216,16859353-16859507,16860118-16860343,
16860423-16860507,16860593-16860689,16861785-16861949,
16862046-16862121,16863041-16863103,16863193-16863359,
16863495-16863669,16863743-16863835,16864694-16864810,
16865589-16865778,16866092-16866126
Length = 1618
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 547 HARRWSECTPRGPRSALAQLRAEADQEA 630
HARR S PR P SA + AEADQ+A
Sbjct: 889 HARRLSPRPPRRPSSAATEPEAEADQDA 916
>12_02_0701 + 22271550-22271652,22272310-22272791,22272823-22272927
Length = 229
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 352 SCRGRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRSK 510
+CR RR R+ P + C RER G+ +++ R + N T RR++
Sbjct: 89 NCRRRRHHPRIRLRPPPTRRHCEREREMRGRGRRDGAERAATNEGGETGRRAR 141
>09_06_0015 -
20234231-20234344,20234846-20234902,20234968-20235111,
20235581-20235745,20235817-20236005,20236086-20236326,
20236412-20236512,20236704-20237241,20238101-20238132,
20238677-20238760
Length = 554
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 309 LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAIKQLEE 488
L EQQ +LQ + RL+E RE K+K+E ++ KQLEE
Sbjct: 390 LLREQQDDEYLASLQADQEKELKALQEAELRRLEETAAREAALEKQKQEEEERRKKQLEE 449
Query: 489 K 491
+
Sbjct: 450 E 450
>02_03_0080 +
14935664-14935796,14943858-14944175,14944352-14945199,
14945249-14945521
Length = 523
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 487 RSTVRRSKISSLNTPVLLQHHARRWSECTPRGPRSALAQLR 609
R+ R SK+ + PV L AR W PRG + A+LR
Sbjct: 96 RAAGRDSKVMANYLPVALADSARSWLHGLPRGTIGSWAELR 136
>04_03_0584 + 17546945-17547382
Length = 145
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 347 LAAAEGGDXGRD--SQTRGP*TERAVGERDGQRERKRRTPSAGNQTIRR 487
+ A GG G + + T G T R G R +RER+ TP AG + RR
Sbjct: 94 VTARNGGQVGGEEAAATPGKATARPAGARS-RRERRLETPGAGEREGRR 141
>04_03_0583 + 17539541-17539978
Length = 145
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 347 LAAAEGGDXGRD--SQTRGP*TERAVGERDGQRERKRRTPSAGNQTIRR 487
+ A GG G + + T G T R G R +RER+ TP AG + RR
Sbjct: 94 VTARNGGQAGGEEAAATPGKATARPAGARS-RRERRLETPDAGEREGRR 141
>12_02_0632 + 21379548-21379886
Length = 112
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +2
Query: 407 ERAV--GERDGQRERKRRTPSAGNQTIRREAQ*GDRKSQV*TRQFCCSITRGGGANARRE 580
E+AV GE DG +RR G +T +EA R + GG RR
Sbjct: 5 EKAVRAGETDGDGGARRRRRGRGRRTATKEATEAARAGEA---------DSDGGGRRRRR 55
Query: 581 DRGQH*LS*EPKLTRKPGTA 640
RG+ + E + +PG A
Sbjct: 56 GRGRRTATEEAEKAARPGEA 75
>08_02_0411 + 16855255-16855644
Length = 129
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 107 GSRGGQISSRREGGEDARRLRVEDEGA*KEGQRSREI*KRAHRGSGKTEGGIA 265
G GG++ RR GG VE+ EG+ E +R +G G E A
Sbjct: 35 GGCGGRLGGRRRGGAGPDLAGVEEAATGDEGEELEE--RRRRQGRGGEEAAAA 85
>08_02_0410 - 16842306-16842950,16844994-16845182
Length = 277
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 101 AAGSRGGQISSRREGGEDARRLR 169
+A GG RREGGED RR R
Sbjct: 168 SAHGEGGDRRRRREGGEDRRRRR 190
>05_05_0394 -
24638466-24638723,24638849-24638914,24639437-24639463,
24640054-24640122
Length = 139
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 586 SVLSACIRSTAARDAAAELACSDLRFSIALLCFSSNCL 473
S A S AR AAA L FS+A +CF ++ L
Sbjct: 91 SAADAVPTSDVARTAAAAATARSLSFSVAAICFLASWL 128
>02_04_0379 - 22491069-22491503
Length = 144
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 107 GSRGGQISSRREGGEDARRLRVEDEGA*KEGQRSREI*KRAHRGSGKTEGG 259
G RGG ++ R +GG A R RV GA G R +R G+ + G
Sbjct: 63 GRRGGTVARRGDGGVGAARGRVARRGAASGGAVGRS--RRTGSGAKRRRRG 111
>01_06_1557 - 38231826-38233391
Length = 521
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 541 QHHARRWSECTPRGPRSALAQLRAEADQEAR 633
Q + RW CTP P S LA + + D ++
Sbjct: 338 QPASSRWWRCTPPAPSSPLAPIASNGDNSSK 368
>05_07_0114 - 27769593-27770267
Length = 224
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 98 MAAGSRGGQISSRREGGEDARRLRVEDEGA 187
MAA ++ + SRR+GGE+ +R +E A
Sbjct: 1 MAAAAQRDDVESRRDGGENEKRPLLEKRSA 30
>09_02_0170 - 5273607-5273929,5274272-5274350,5274627-5274629
Length = 134
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +3
Query: 309 LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAIKQLEE 488
+ + V LT++L++ + E E+E KEKEE+ ++ ++ E+
Sbjct: 43 IVGNENMDVTCLTMELRKQMRRTHIVIDTVTPVDEKKEKEEKEKKEKEEKEKKEKEEKEK 102
Query: 489 KHSKAIEN 512
K + +N
Sbjct: 103 KKKEEEQN 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,134,624
Number of Sequences: 37544
Number of extensions: 209073
Number of successful extensions: 1173
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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