Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1468
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.50 
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   3.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   8.2  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 355 CRGRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRR 504
           CR R R    + +RP+  +   R+    GKK      R+S   +RS   R
Sbjct: 506 CRPRARRNPPATTRPVRHRPTRRKSTKRGKKDDKGYDRRSGKEERSNDNR 555


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 16/75 (21%), Positives = 30/75 (40%)
 Frame = +3

Query: 300 LRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAIKQ 479
           + GL+S   + + S  L+LQ              + KELL+R      +KE      ++ 
Sbjct: 727 INGLSSSWHKVLDSTQLRLQSTTDNATDSENSSSKRKELLQRMMKKALQKENSLTTELES 786

Query: 480 LEEKHSKAIENLKSE 524
                   +++L +E
Sbjct: 787 TAAAAGGGLQSLTAE 801


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 408 KELLERETVSGKEKEERHQQAIKQLEEKHSKA 503
           KE++ER     K K    QQ + +L E+H  A
Sbjct: 826 KEMVERSRPLRKRKRLVVQQHLHELAEEHELA 857


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,851
Number of Sequences: 2352
Number of extensions: 5532
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)