Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1468
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 35 0.28
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 34 0.49
AK091682-1|BAC03719.1| 936|Homo sapiens protein ( Homo sapiens ... 32 2.0
BC098576-1|AAH98576.1| 918|Homo sapiens inner centromere protei... 31 2.6
AY714053-1|AAU04398.1| 918|Homo sapiens inner centromere protei... 31 2.6
AF282265-1|AAF87584.1| 919|Homo sapiens inner centromere protei... 31 2.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 3.4
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 31 4.6
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 31 4.6
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 31 4.6
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 31 4.6
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 31 4.6
BX538186-1|CAD98058.1| 971|Homo sapiens hypothetical protein pr... 30 6.0
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 6.0
BC060769-1|AAH60769.2| 1107|Homo sapiens chromosome 6 open readi... 30 6.0
BC009055-1|AAH09055.2| 453|Homo sapiens C6orf60 protein protein. 30 6.0
AY131226-1|AAN07912.1| 681|Homo sapiens medulloblastoma antigen... 30 6.0
AL365275-1|CAI40383.1| 1140|Homo sapiens chromosome 6 open readi... 30 6.0
AL137009-1|CAI20344.1| 1140|Homo sapiens chromosome 6 open readi... 30 6.0
AL132874-2|CAI42604.1| 1140|Homo sapiens chromosome 6 open readi... 30 6.0
AK127744-1|BAC87110.1| 600|Homo sapiens protein ( Homo sapiens ... 30 6.0
AK024004-1|BAB14769.1| 519|Homo sapiens protein ( Homo sapiens ... 30 6.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 6.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 6.0
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 6.0
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 6.0
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 30 8.0
DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein k... 30 8.0
BC047871-1|AAH47871.1| 933|Homo sapiens CDC42BPB protein protein. 30 8.0
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 30 8.0
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 30 8.0
AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein k... 30 8.0
AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein. 30 8.0
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 34.7 bits (76), Expect = 0.28
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 402 RLKELLERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSE 524
RL++ L+RE V E+EER +Q +K+ E + + + LKSE
Sbjct: 597 RLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSE 637
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 318 EQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAIKQLEEK 491
+Q+R Q L + + RL++ L E +E+EER +Q +K+ EEK
Sbjct: 499 QQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEK 556
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 33.9 bits (74), Expect = 0.49
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 402 RLKELLERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSE 524
RL++ L+RE V E+EER + +K+ E + + E LKSE
Sbjct: 616 RLEQRLKREEVERLEQEERRDERLKREEPEEERRHELLKSE 656
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 318 EQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAIKQLEEK 491
+Q+R Q L + + RL++ L E +E+EER +Q +K+ EEK
Sbjct: 518 QQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERLEQLLKREEEK 575
>AK091682-1|BAC03719.1| 936|Homo sapiens protein ( Homo sapiens
cDNA FLJ34363 fis, clone FEBRA2015042. ).
Length = 936
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EERHQQ K L+E H A + ++ E +++ H+
Sbjct: 607 QRLTQELEELEERHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 658
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 595 LQQLQAQFTQERQRLTQELE-ELEERHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 649
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 650 E--NHLQQKHSAELQSLKDAH 668
>BC098576-1|AAH98576.1| 918|Homo sapiens inner centromere protein
antigens 135/155kDa protein.
Length = 918
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +3
Query: 294 QQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAI 473
+Q R LA +++R Q LQ +R KE L+RE K+KEE+ + A
Sbjct: 714 EQERQLAEQERRREQE-RLQAERELQEREKALRLQ---KEQLQRELEEKKKKEEQQRLAE 769
Query: 474 KQLEEKHSK 500
+QL+E+ K
Sbjct: 770 RQLQEEQEK 778
>AY714053-1|AAU04398.1| 918|Homo sapiens inner centromere protein
protein.
Length = 918
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +3
Query: 294 QQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAI 473
+Q R LA +++R Q LQ +R KE L+RE K+KEE+ + A
Sbjct: 714 EQERQLAEQERRREQE-RLQAERELQEREKALRLQ---KEQLQRELEEKKKKEEQQRLAE 769
Query: 474 KQLEEKHSK 500
+QL+E+ K
Sbjct: 770 RQLQEEQEK 778
>AF282265-1|AAF87584.1| 919|Homo sapiens inner centromere protein
INCENP protein.
Length = 919
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +3
Query: 294 QQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQAI 473
+Q R LA +++R Q LQ +R KE L+RE K+KEE+ + A
Sbjct: 715 EQERQLAEQERRREQE-RLQAERELQEREKALRLQ---KEQLQRELEEKKKKEEQQRLAE 770
Query: 474 KQLEEKHSK 500
+QL+E+ K
Sbjct: 771 RQLQEEQEK 779
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 3.4
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 TPRNGGRLTRRSDLKPPRGR-RGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXX 264
TP GR R+ P RGR R S GR S R P+++ SS+RK K+
Sbjct: 733 TPARRGRSRSRT---PRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQR 787
Query: 265 XXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCRGRRRXKR-LSNSRPID*KSCWRERRSAG 441
+SP R S S + R +R LS S P C +++
Sbjct: 788 RSRSNSSPEMKKSRISSRRSRS-LSSPRSKAKSRLSLRRSLSGSSP-----CPKQKSQTP 841
Query: 442 KKKKNAISRQSNN*KRSTVRRSKISSLNTP 531
++ + S Q+ R+ RRS+ SS P
Sbjct: 842 PRRSRSGSSQTKAKSRTPPRRSRSSSSPPP 871
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = +1
Query: 181 GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCR 360
G+ K EK R K+ +R+ + +S SSS SSSG S S
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS 106
Query: 361 GRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRS 507
G R S+S RR +++ + S+ ++ RRS
Sbjct: 107 GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = +1
Query: 181 GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCR 360
G+ K EK R K+ +R+ + +S SSS SSSG S S
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS 106
Query: 361 GRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRS 507
G R S+S RR +++ + S+ ++ RRS
Sbjct: 107 GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = +1
Query: 181 GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCR 360
G+ K EK R K+ +R+ + +S SSS SSSG S S
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS 106
Query: 361 GRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRS 507
G R S+S RR +++ + S+ ++ RRS
Sbjct: 107 GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = +1
Query: 181 GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCR 360
G+ K EK R K+ +R+ + +S SSS SSSG S S
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS 106
Query: 361 GRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRS 507
G R S+S RR +++ + S+ ++ RRS
Sbjct: 107 GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = +1
Query: 181 GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCR 360
G+ K EK R K+ +R+ + +S SSS SSSG S S
Sbjct: 24 GATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS 83
Query: 361 GRRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRS 507
G R S+S RR +++ + S+ ++ RRS
Sbjct: 84 GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 132
>BX538186-1|CAD98058.1| 971|Homo sapiens hypothetical protein
protein.
Length = 971
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 607 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 658
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 595 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 649
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 650 E--NHLQQKHSAELQSLKDAH 668
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.3 bits (65), Expect = 6.0
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 TPRNGGRLTRRSDLKPPRGR-RGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXX 264
TP GR R+ P RGR R S GR S R P+++ SS+RK K+
Sbjct: 685 TPARRGRSRSRT---PRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQR 739
Query: 265 XXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCRGRRRXKR-LSNSRPID*KSCWRERRSAG 441
+SP R S S + R +R LS S P C +++
Sbjct: 740 RSRSNSSPEMKKSRISSRRSRS-LSSPRSKAKSRLSLRRSLSGSSP-----CPKQKSQTP 793
Query: 442 KKKKNAISRQSNN*KRSTVRRSKISSLNTP 531
++ + S Q R+ RRS+ SS P
Sbjct: 794 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPP 823
>BC060769-1|AAH60769.2| 1107|Homo sapiens chromosome 6 open reading
frame 60 protein.
Length = 1107
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 694 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 745
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 682 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 736
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 737 E--NHLQQKHSAELQSLKDAH 755
>BC009055-1|AAH09055.2| 453|Homo sapiens C6orf60 protein protein.
Length = 453
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 40 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 91
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 28 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 82
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 83 E--NHLQQKHSAELQSLKDAH 101
>AY131226-1|AAN07912.1| 681|Homo sapiens medulloblastoma antigen
MU-MB-20.201 protein.
Length = 681
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 268 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 319
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 256 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 310
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 311 E--NHLQQKHSAELQSLKDAH 329
>AL365275-1|CAI40383.1| 1140|Homo sapiens chromosome 6 open reading
frame 60 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 727 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 778
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 715 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 769
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 770 E--NHLQQKHSAELQSLKDAH 788
>AL137009-1|CAI20344.1| 1140|Homo sapiens chromosome 6 open reading
frame 60 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 727 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 778
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 715 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 769
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 770 E--NHLQQKHSAELQSLKDAH 788
>AL132874-2|CAI42604.1| 1140|Homo sapiens chromosome 6 open reading
frame 60 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 727 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 778
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 715 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 769
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 770 E--NHLQQKHSAELQSLKDAH 788
>AK127744-1|BAC87110.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ45844 fis, clone OCBBF2003518. ).
Length = 600
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 236 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 287
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 224 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 278
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 279 E--NHLQQKHSAELQSLKDAH 297
>AK024004-1|BAB14769.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ13942 fis, clone Y79AA1000962, weakly similar to
MYOSIN HEAVY CHAIN, NON-MUSCLE. ).
Length = 519
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 420 ERETVSGKEKEERHQQAIKQLEEKHSKAIENLKSEHXXXXXXXXXXVERMHA 575
+R T +E EE+HQQ K L+E H A + ++ E +++ H+
Sbjct: 106 QRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHS 157
Score = 29.9 bits (64), Expect = 8.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 LQQLRG-LASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLK-ELLERETVSGKEKEERHQ 464
LQQL+ E+QR Q L +L+ H L + +E E KEKE+R
Sbjct: 94 LQQLQAQFTQERQRLTQELE-ELEEQHQQRHKSLKEAHVLAFQTMEEE----KEKEQRAL 148
Query: 465 QAIKQLEEKHSKAIENLKSEH 527
+ L++KHS +++LK H
Sbjct: 149 E--NHLQQKHSAELQSLKDAH 167
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 6.0
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 TPRNGGRLTRRSDLKPPRGR-RGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXX 264
TP GR R+ P RGR R S GR S R P+++ SS+RK K+
Sbjct: 685 TPARRGRSRSRT---PRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQR 739
Query: 265 XXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCRGRRRXKR-LSNSRPID*KSCWRERRSAG 441
+SP R S S + R +R LS S P C +++
Sbjct: 740 RSRSNSSPEMKKSRISSRRSRS-LSSPRSKAKSRLSLRRSLSGSSP-----CPKQKSQTP 793
Query: 442 KKKKNAISRQSNN*KRSTVRRSKISSLNTP 531
++ + S Q R+ RRS+ SS P
Sbjct: 794 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPP 823
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 6.0
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 TPRNGGRLTRRSDLKPPRGR-RGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXX 264
TP GR R+ P RGR R S GR S R P+++ SS+RK K+
Sbjct: 685 TPARRGRSRSRT---PRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQR 739
Query: 265 XXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCRGRRRXKR-LSNSRPID*KSCWRERRSAG 441
+SP R S S + R +R LS S P C +++
Sbjct: 740 RSRSNSSPEMKKSRISSRRSRS-LSSPRSKAKSRLSLRRSLSGSSP-----CPKQKSQTP 793
Query: 442 KKKKNAISRQSNN*KRSTVRRSKISSLNTP 531
++ + S Q R+ RRS+ SS P
Sbjct: 794 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPP 823
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein protein.
Length = 956
Score = 30.3 bits (65), Expect = 6.0
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 TPRNGGRLTRRSDLKPPRGR-RGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXX 264
TP GR R+ P RGR R S GR S R P+++ SS+RK K+
Sbjct: 650 TPARRGRSRSRT---PRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQR 704
Query: 265 XXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCRGRRRXKR-LSNSRPID*KSCWRERRSAG 441
+SP R S S + R +R LS S P C +++
Sbjct: 705 RSRSNSSPEMKKSRISSRRSRS-LSSPRSKAKSRLSLRRSLSGSSP-----CPKQKSQTP 758
Query: 442 KKKKNAISRQSNN*KRSTVRRSKISSLNTP 531
++ + S Q R+ RRS+ SS P
Sbjct: 759 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPP 788
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.3 bits (65), Expect = 6.0
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 TPRNGGRLTRRSDLKPPRGR-RGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXX 264
TP GR R+ P RGR R S GR S R P+++ SS+RK K+
Sbjct: 475 TPARRGRSRSRT---PRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQR 529
Query: 265 XXXXXTSPSSSSCGAWLRSSSGPFSL*PCSCRGRRRXKR-LSNSRPID*KSCWRERRSAG 441
+SP R S S + R +R LS S P C +++
Sbjct: 530 RSRSNSSPEMKKSRISSRRSRS-LSSPRSKAKSRLSLRRSLSGSSP-----CPKQKSQTP 583
Query: 442 KKKKNAISRQSNN*KRSTVRRSKISSLNTP 531
++ + S Q R+ RRS+ SS P
Sbjct: 584 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPP 613
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 529 PVLLQHHARRWSECTPRGPRSALAQLRAEADQEA 630
PVL H AR W + PR+ + LR DQ +
Sbjct: 41 PVLAWHSARCWCQAWTEEPRALCSSLRMNGDQNS 74
>DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein
kinase beta (DMPK-like) protein.
Length = 1711
Score = 29.9 bits (64), Expect = 8.0
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 288 ELQQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQ 467
E+++L+ ++ R L QL+ RL+ L ++ V +EKEE H+Q
Sbjct: 493 EIERLKNKIADSNR----LERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQ 548
Query: 468 AIKQLEEKHSKAIENLKSEH 527
++ E S+A E LK H
Sbjct: 549 LVEASERLKSQAKE-LKDAH 567
>BC047871-1|AAH47871.1| 933|Homo sapiens CDC42BPB protein protein.
Length = 933
Score = 29.9 bits (64), Expect = 8.0
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 288 ELQQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQ 467
E+++L+ ++ R L QL+ RL+ L ++ V +EKEE H+Q
Sbjct: 493 EIERLKNKIADSNR----LERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQ 548
Query: 468 AIKQLEEKHSKAIENLKSEH 527
++ E S+A E LK H
Sbjct: 549 LVEASERLKSQAKE-LKDAH 567
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 529 PVLLQHHARRWSECTPRGPRSALAQLRAEADQEA 630
PVL H AR W + PR+ + LR DQ +
Sbjct: 40 PVLAWHSARCWCQAWTEEPRALCSSLRMNGDQNS 73
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 529 PVLLQHHARRWSECTPRGPRSALAQLRAEADQEA 630
PVL H AR W + PR+ + LR DQ +
Sbjct: 40 PVLAWHSARCWCQAWTEEPRALCSSLRMNGDQNS 73
>AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein
kinase beta protein.
Length = 1711
Score = 29.9 bits (64), Expect = 8.0
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 288 ELQQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQ 467
E+++L+ ++ R L QL+ RL+ L ++ V +EKEE H+Q
Sbjct: 493 EIERLKNKIADSNR----LERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQ 548
Query: 468 AIKQLEEKHSKAIENLKSEH 527
++ E S+A E LK H
Sbjct: 549 LVEASERLKSQAKE-LKDAH 567
>AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein.
Length = 1760
Score = 29.9 bits (64), Expect = 8.0
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 288 ELQQLRGLASEQQRSVQSLTLQLQRXXXXXXXXXXXXHRLKELLERETVSGKEKEERHQQ 467
E+++L+ ++ R L QL+ RL+ L ++ V +EKEE H+Q
Sbjct: 542 EIERLKNKIADSNR----LERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQ 597
Query: 468 AIKQLEEKHSKAIENLKSEH 527
++ E S+A E LK H
Sbjct: 598 LVEASERLKSQAKE-LKDAH 616
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,043,969
Number of Sequences: 237096
Number of extensions: 894117
Number of successful extensions: 5011
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4995
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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