Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1468
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3104|AAN13905.1|  673|Drosophila melanogaster CG5740-PB...    32   0.75 
AE014297-3103|AAF55957.3|  733|Drosophila melanogaster CG5740-PA...    32   0.75 
AF132148-1|AAD34736.1|  653|Drosophila melanogaster unknown prot...    31   1.7  
AE014297-3634|AAF56342.1|  653|Drosophila melanogaster CG5808-PA...    31   1.7  
BT022798-1|AAY55214.1|  562|Drosophila melanogaster IP13650p pro...    29   4.0  
BT022774-1|AAY55190.1|  420|Drosophila melanogaster IP13950p pro...    29   4.0  
BT022766-1|AAY55182.1|  560|Drosophila melanogaster IP13850p pro...    29   4.0  
AE014296-2087|AAF49969.1|  564|Drosophila melanogaster CG6793-PA...    29   4.0  
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA...    29   5.3  

>AE014297-3104|AAN13905.1|  673|Drosophila melanogaster CG5740-PB,
           isoform B protein.
          Length = 673

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 60  KEALASAEADTA----KWRQAHEAVRSQAAARAERMLGDCEW 173
           K AL ++EA+      KW++  E +R+    R E ++ DCEW
Sbjct: 122 KNALDNSEAERKICEDKWQKEFEMLRTHNREREETLMTDCEW 163


>AE014297-3103|AAF55957.3|  733|Drosophila melanogaster CG5740-PA,
           isoform A protein.
          Length = 733

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 60  KEALASAEADTA----KWRQAHEAVRSQAAARAERMLGDCEW 173
           K AL ++EA+      KW++  E +R+    R E ++ DCEW
Sbjct: 182 KNALDNSEAERKICEDKWQKEFEMLRTHNREREETLMTDCEW 223


>AF132148-1|AAD34736.1|  653|Drosophila melanogaster unknown
           protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 24/92 (26%), Positives = 40/92 (43%)
 Frame = +1

Query: 364 RRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRSKISSLNTPVLLQ 543
           R+  +R + S+  D KS +R      KK +N   R+++N +R+   +    S +      
Sbjct: 397 RKNLQRRTRSKEKDEKSVYRS-----KKSQNESVRENSNRERNRNEKRSSRSRDATHRRY 451

Query: 544 HHARRWSECTPRGPRSALAQLRAEADQEARNR 639
             +R   E  P  PR  L +     DQ+ R R
Sbjct: 452 SRSRDREERRPSRPRDQLGRRSRSRDQKERRR 483


>AE014297-3634|AAF56342.1|  653|Drosophila melanogaster CG5808-PA
           protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 24/92 (26%), Positives = 40/92 (43%)
 Frame = +1

Query: 364 RRRXKRLSNSRPID*KSCWRERRSAGKKKKNAISRQSNN*KRSTVRRSKISSLNTPVLLQ 543
           R+  +R + S+  D KS +R      KK +N   R+++N +R+   +    S +      
Sbjct: 397 RKNLQRRTRSKEKDEKSVYRS-----KKSQNESVRENSNRERNRNEKRSSRSRDATHRRY 451

Query: 544 HHARRWSECTPRGPRSALAQLRAEADQEARNR 639
             +R   E  P  PR  L +     DQ+ R R
Sbjct: 452 SRSRDREERRPSRPRDQLGRRSRSRDQKERRR 483


>BT022798-1|AAY55214.1|  562|Drosophila melanogaster IP13650p
           protein.
          Length = 562

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 408 KELLERETVSGKEKEERHQQAIKQLEEKHS 497
           KEL  R   S +E EERH++ ++++ + HS
Sbjct: 314 KELAPRLHYSAREDEERHKRQLEEMRKVHS 343


>BT022774-1|AAY55190.1|  420|Drosophila melanogaster IP13950p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 408 KELLERETVSGKEKEERHQQAIKQLEEKHS 497
           KEL  R   S +E EERH++ ++++ + HS
Sbjct: 172 KELAPRLHYSAREDEERHKRQLEEMRKVHS 201


>BT022766-1|AAY55182.1|  560|Drosophila melanogaster IP13850p
           protein.
          Length = 560

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 408 KELLERETVSGKEKEERHQQAIKQLEEKHS 497
           KEL  R   S +E EERH++ ++++ + HS
Sbjct: 312 KELAPRLHYSAREDEERHKRQLEEMRKVHS 341


>AE014296-2087|AAF49969.1|  564|Drosophila melanogaster CG6793-PA
           protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 408 KELLERETVSGKEKEERHQQAIKQLEEKHS 497
           KEL  R   S +E EERH++ ++++ + HS
Sbjct: 316 KELAPRLHYSAREDEERHKRQLEEMRKVHS 345


>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
            protein.
          Length = 1543

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 20/70 (28%), Positives = 31/70 (44%)
 Frame = +1

Query: 121  SDLKPPRGRRGCSETASGR*GSLKRGPEKQRNLKKSSQRKWKNXXXXXXXXXXTSPSSSS 300
            S L+ P+ +       SG     +  PEK++  K+ +    K           T+ SSS+
Sbjct: 1338 STLEEPKPKASTQRKLSGHWIDFENIPEKRKPAKRITTLP-KETLTSSVPATATTSSSSA 1396

Query: 301  CGAWLRSSSG 330
            CG+  RS SG
Sbjct: 1397 CGSGHRSGSG 1406


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,958,865
Number of Sequences: 53049
Number of extensions: 313450
Number of successful extensions: 1708
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1688
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)