Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1460
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 49 4e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 49 4e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 44 1e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 39 0.004
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 37 0.016
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 37 0.016
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 37 0.016
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.038
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 33 0.20
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 33 0.20
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 33 0.20
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 33 0.20
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 1.1
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 26 1.2
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 26 1.2
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 26 1.2
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 26 1.3
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 26 1.4
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 26 1.4
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 30 1.4
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 29 2.5
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 2.5
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.3
Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical p... 29 3.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.3
AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box transcr... 29 3.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 4.4
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.8
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 28 5.8
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 5.8
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 5.8
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 28 5.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 7.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 7.6
U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical p... 28 7.6
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 28 7.6
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 28 7.6
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 7.6
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 7.6
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 28 7.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 7.6
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +2
Query: 131 CPAK-DGQYEDDRQCDKFFECVDG-VATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRT 304
C K DG Y ++R C +C G + C L F+ + KCD P V G
Sbjct: 1182 CDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFN---QLTGKCDYPQKVS-GCEN 1237
Query: 305 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 484
Q N +C F A D + C +FY C+ G + C +G F+ C WP +
Sbjct: 1238 HGQT---NGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSA 1292
Query: 485 AGRQGCNEQQKKTKDGF 535
C+ Q + +
Sbjct: 1293 V--PSCSGQASDSNSSY 1307
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 128 KCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQP 277
+C D C+ F+ CV G CP G VF+P ++ CD P
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPL---LSVCDWP 1290
Score = 33.1 bits (72), Expect = 0.20
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 6/159 (3%)
Frame = +2
Query: 119 AQFKCPAKDGQYEDDRQCDKFFE-CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCG 295
A +CPA C + + CV+GV C D VF + D+
Sbjct: 27 AATECPAYFNGNIAGNACSREYSICVNGVRQAATCSDDSVFYED--ECVPVDESPECRVD 84
Query: 296 DRTELQP-PKPNSQCP-RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 469
+ TE P C +++G ++ N F +C+ G A KC L F+E + C
Sbjct: 85 ENTEEDDTPYAEFDCTSKQDGIYSI---GCSNQFISCVAGGAYMAKCPDSLVFNERTQDC 141
Query: 470 VWPDSAGRQGCNEQQKKTKDG---FECPKEQLVDAQGQI 577
R+ C+E ++ T +E +E +A G+I
Sbjct: 142 -------RESCDEVKQDTTTAPQVYEDGEEGYGEASGEI 173
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 116 SAQFKCPA-KDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 241
S F C +DG Y D D F+ C + + + CP G VF+
Sbjct: 188 SIDFDCNGLEDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVFN 229
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 143 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPP 319
DG + FF C +G+A + CP LVF+P I+ CD P NV DC +++E
Sbjct: 182 DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPA---ISSCDWPKNVMDCSEKSE---- 234
Query: 320 KPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 469
KP + C +G+F+ S + F C G + C GL F E + C
Sbjct: 235 KPQN-CGEVDGYFSFGRCS--SSFSACTNGIPIVMFCPDGLMFSEKNQMC 281
Score = 44.4 bits (100), Expect = 8e-05
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Frame = +2
Query: 131 CPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD-C----- 292
C DG + R F C +G+ CPDGL+F K CD +NVD C
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFS---EKNQMCDYEWNVDECDLESS 295
Query: 293 GDRTELQPPKPNSQCPRR-NGFFA-HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGT 466
G + + + C NG +A P V +C G +C L F+E S
Sbjct: 296 GFMENYKASEALTPCTNMDNGLYALDCTPRV----LSCQNGRENIFECPPSLVFNENSLI 351
Query: 467 CVWPDSA 487
C +P+++
Sbjct: 352 CDYPETS 358
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Frame = +2
Query: 140 KDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 319
KDG Y + C G C L++DPT +K C +D
Sbjct: 123 KDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKK---CSWKGMID---------- 169
Query: 320 KPNSQCPRRNGFFAHPDPSV----C-NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 484
+C + +G + D ++ C N+F++C EG A C A L F+ +C WP +
Sbjct: 170 ----ECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKN 225
Query: 485 AGRQGCNEQQKKTKD 529
C+E+ +K ++
Sbjct: 226 V--MDCSEKSEKPQN 238
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 143 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTE 307
DG Y +F CV G A CP+ LV+ + + CD NV +CG+ E
Sbjct: 30 DGMYPLGACEPRFLACVSGEARYMDCPEDLVYH---KNLEFCDWRHNVFECGEEGE 82
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 48.8 bits (111), Expect = 4e-06
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Frame = +2
Query: 131 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 304
C K DG + + F C G+A CP LVF+PTI CD P +V +C
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL- 302
Query: 305 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 484
P P C +G+F+ S + F C G A + C AGL F E + C + +
Sbjct: 303 ----PTPQPTC-EEDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESN 355
Query: 485 AGRQGCNEQQKKTKDGFECPKEQLVDAQGQ 574
C Q+ ++ E EQ + G+
Sbjct: 356 VSE--C--QETSGEESGEASGEQSGEGSGE 381
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 48.8 bits (111), Expect = 4e-06
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Frame = +2
Query: 131 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 304
C K DG + + F C G+A CP LVF+PTI CD P +V +C
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL- 302
Query: 305 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 484
P P C +G+F+ S + F C G A + C AGL F E + C + +
Sbjct: 303 ----PTPQPTC-EEDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESN 355
Query: 485 AGRQGCNEQQKKTKDGFECPKEQLVDAQGQ 574
C Q+ ++ E EQ + G+
Sbjct: 356 VSE--C--QETSGEESGEASGEQSGEGSGE 381
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +2
Query: 131 CPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTEL 310
CP DG Y K+ +CV+ V + CP+GL FD + + + GDR L
Sbjct: 43 CPDGDGLYAVGCS-SKYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL 101
Query: 311 --QPPKPNSQC-PRRNGFFAHPDPSVCN-IFYNCIEGEATEVKC 430
+ + C R +G +A D +VCN +Y C G + KC
Sbjct: 102 NVRQKAVSINCVGRLSGDYA-LDKTVCNENYYQCANGISYMRKC 144
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 383 NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPK 547
++FY C G+ C A L F+ Y G C + S + C Q T + PK
Sbjct: 589 SVFYICANGQVVATTCPANLIFNPYVGECDY--STNVRDCQGYQPTTTPSYSYPK 641
Score = 34.7 bits (76), Expect = 0.066
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +2
Query: 125 FKCPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD-CGD 298
F C + DG Y + +C+ G + C GL ++ K C VD C
Sbjct: 887 FSCSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYN---EKNGMCAYKHTVDTCKI 943
Query: 299 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVW 475
N+ + +G+++ + C+ +Y +CI+ + ++ C L F + S CV+
Sbjct: 944 GKGSDIIDSNACFGKSDGYYS----AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVF 999
Query: 476 PDSA 487
P A
Sbjct: 1000 PIDA 1003
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +2
Query: 143 DGQYEDDRQCDKFF-ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DC----GDRT 304
D + D+ +C +F +C +G K CP+ L++ + N CD P +V DC G T
Sbjct: 208 DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIY---VLDQNLCDFPESVKDCPEYNGSET 264
Query: 305 ELQPPK 322
+ PK
Sbjct: 265 SYRAPK 270
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 110 IASAQFKCP-AKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV 286
IA F C DG + F+ C +G CP L+F+P + +CD NV
Sbjct: 567 IALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNP---YVGECDYSTNV 623
Query: 287 -DC 292
DC
Sbjct: 624 RDC 626
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 107 AIASAQFKCPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 241
A F C K +G+Y + FF C DG A CP LVF+
Sbjct: 425 AEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFN 470
Score = 31.1 bits (67), Expect = 0.82
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Frame = +2
Query: 131 CPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKC----------DQPF 280
C +DG + F C +GV C D LVFD + D P
Sbjct: 353 CKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDVPV 412
Query: 281 NVDCGDRTELQPP--KPNSQCP-RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFD 451
+ G +P K + C + NG + + F+ C +G A C L F+
Sbjct: 413 LYNHGGAYNERPAEVKVDFDCTGKPNGKYI--KEACTKSFFTCHDGRAFANDCPGDLVFN 470
Query: 452 EYSGTC 469
+ +GTC
Sbjct: 471 KATGTC 476
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +2
Query: 95 TAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQ 274
T + FKC KDG + C KF CV+G++ CP+GL F CD+
Sbjct: 554 TRAPTTTTPAFKC-TKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTM---MCDR 609
Query: 275 PFNVDC 292
P C
Sbjct: 610 PDPSKC 615
Score = 37.1 bits (82), Expect = 0.012
Identities = 36/147 (24%), Positives = 50/147 (34%), Gaps = 19/147 (12%)
Frame = +2
Query: 98 AVAAIASAQFKCPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQ 274
A AS C K DG Y + C F C+ + + CP GL + +++ C
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLK---YCTT 526
Query: 275 PFNVDCGDRTELQPPKPNSQCP------------------RRNGFFAHPDPSVCNIFYNC 400
C T P P ++GFF PS C F C
Sbjct: 527 STASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFG--VPSDCLKFIRC 584
Query: 401 IEGEATEVKCTAGLHFDEYSGTCVWPD 481
+ G + +C GL F + C PD
Sbjct: 585 VNGISYNFECPNGLSFHADTMMCDRPD 611
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 303 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 483 PPEDKDVTNNKKKQRTASSAPKSS 554
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 303 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 483 PPEDKDVTNNKKKQRTASSAPKSS 554
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 303 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 483 PPEDKDVTNNKKKQRTASSAPKSS 554
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 303 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 483 PPEDKDVTNNKKKQRTASSAPKSS 554
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 35.5 bits (78), Expect = 0.038
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 131 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 304
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 305 ELQPPKPNSQCPRRNGFFAHPDPSVC 382
+ + NG F P+ + C
Sbjct: 118 QDVTSTQEAIFICENGLFFSPEQARC 143
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 131 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCG--- 295
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 296 -DRTELQPPKPNSQ 334
D T Q P+ +
Sbjct: 118 QDVTSTQEAYPSEE 131
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 131 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCG--- 295
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 296 -DRTELQPPKPNSQ 334
D T Q P+ +
Sbjct: 118 QDVTSTQEAYPSEE 131
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.1 bits (72), Expect = 0.20
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Frame = +2
Query: 167 QCDKFF---ECVDGV---ATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPN 328
+CD F C DG+ + K CP F R KC + + C + T
Sbjct: 685 RCDPVFGYCTCPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT-------- 735
Query: 329 SQCPRRNGFFAHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG-- 499
+C + G++ H +C+ + G A + C AG+ D +G C AG QG
Sbjct: 736 GKCRCKPGYYGHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNL 793
Query: 500 CNEQQKKTKDGFECPKE 550
C++ G++C ++
Sbjct: 794 CDQPCPAGYFGYDCEQK 810
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.1 bits (72), Expect = 0.20
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Frame = +2
Query: 167 QCDKFF---ECVDGV---ATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPN 328
+CD F C DG+ + K CP F R KC + + C + T
Sbjct: 685 RCDPVFGYCTCPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT-------- 735
Query: 329 SQCPRRNGFFAHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG-- 499
+C + G++ H +C+ + G A + C AG+ D +G C AG QG
Sbjct: 736 GKCRCKPGYYGHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNL 793
Query: 500 CNEQQKKTKDGFECPKE 550
C++ G++C ++
Sbjct: 794 CDQPCPAGYFGYDCEQK 810
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 365 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 469
PD C FY C G T+ C G +D++ TC
Sbjct: 167 PDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTC 201
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 25.8 bits (54), Expect(2) = 1.2
Identities = 13/43 (30%), Positives = 30/43 (69%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
Q+ ++S+P+ TA+ TT+++TS+ + S +P+S+ ++ S+
Sbjct: 1689 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 1730
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 306 NSSPPS--PTHNVPAAMDSLPIP 368
NS P S PTH VP+++ + IP
Sbjct: 1724 NSIPSSSTPTHTVPSSVPATVIP 1746
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 25.8 bits (54), Expect(2) = 1.2
Identities = 13/43 (30%), Positives = 30/43 (69%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
Q+ ++S+P+ TA+ TT+++TS+ + S +P+S+ ++ S+
Sbjct: 1689 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 1730
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 306 NSSPPS--PTHNVPAAMDSLPIP 368
NS P S PTH VP+++ + IP
Sbjct: 1724 NSIPSSSTPTHTVPSSVPATVIP 1746
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 25.8 bits (54), Expect(2) = 1.2
Identities = 13/43 (30%), Positives = 30/43 (69%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
Q+ ++S+P+ TA+ TT+++TS+ + S +P+S+ ++ S+
Sbjct: 1689 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 1730
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 306 NSSPPS--PTHNVPAAMDSLPIP 368
NS P S PTH VP+++ + IP
Sbjct: 1724 NSIPSSSTPTHTVPSSVPATVIP 1746
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 25.8 bits (54), Expect(2) = 1.3
Identities = 13/43 (30%), Positives = 30/43 (69%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
Q+ ++S+P+ TA+ TT+++TS+ + S +P+S+ ++ S+
Sbjct: 129 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 170
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 306 NSSPPS--PTHNVPAAMDSLPIP 368
NS P S PTH VP+++ + IP
Sbjct: 164 NSIPSSSTPTHTVPSSVPATVIP 186
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 25.8 bits (54), Expect(2) = 1.4
Identities = 13/43 (30%), Positives = 30/43 (69%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
Q+ ++S+P+ TA+ TT+++TS+ + S +P+S+ ++ S+
Sbjct: 124 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 165
Score = 23.0 bits (47), Expect(2) = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 306 NSSPPS--PTHNVPAAMDSLPIP 368
NS P S PTH VP+++ + IP
Sbjct: 159 NSIPSSSTPTHTVPSSVPATVIP 181
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 25.8 bits (54), Expect(2) = 1.4
Identities = 13/43 (30%), Positives = 30/43 (69%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
Q+ ++S+P+ TA+ TT+++TS+ + S +P+S+ ++ S+
Sbjct: 43 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 84
Score = 23.0 bits (47), Expect(2) = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 306 NSSPPS--PTHNVPAAMDSLPIP 368
NS P S PTH VP+++ + IP
Sbjct: 78 NSIPSSSTPTHTVPSSVPATVIP 100
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 30.3 bits (65), Expect = 1.4
Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 22/133 (16%)
Frame = +2
Query: 125 FKCPAKDGQYED----DRQCDKFFECVDGVATTKLCP-DGLVFDPTIRKI--NKCDQPFN 283
F CPA G + + CD F+C DG K P V + +I+ NKC +
Sbjct: 377 FTCPAVGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKECVVESSIQFTCDNKCLESSR 436
Query: 284 -----VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSV------CNIFYNCIEGEATEVKC 430
DC D+++ K +CP R+ F D CN C +G + E KC
Sbjct: 437 RCDGVWDCEDKSD---EKGCDKCPSRS-FKCSADKKCLPFHTRCNGVAECSDG-SDEHKC 491
Query: 431 TA----GLHFDEY 457
+ G H D Y
Sbjct: 492 SCQECLGTHHDTY 504
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/98 (24%), Positives = 36/98 (36%)
Frame = +2
Query: 113 ASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 292
+S QF C K E R+CD ++C D + K C KC PF+ C
Sbjct: 421 SSIQFTCDNKC--LESSRRCDGVWDCEDK-SDEKGCDKCPSRSFKCSADKKC-LPFHTRC 476
Query: 293 GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIE 406
E +C + H D +C+ C++
Sbjct: 477 NGVAECSDGSDEHKCSCQECLGTHHDTYMCSESNRCLK 514
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 266 CDQPFNVDC--GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF 391
C+ PF+V G T P PN P GF+++ D + +F
Sbjct: 161 CEVPFHVTSTSGTPTRAPTPTPNGSVPCPEGFWSYKDNTCLKLF 204
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +3
Query: 111 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVL 233
+ AP++S P T+S+ T+ +TSSS+++ P+++ + L
Sbjct: 217 ISAPSTSQPSTTSSLITSPPSTSSSSMAPRKTPPNASSSSL 257
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 284 VDCGDRTELQPPKPNSQCPRRNGF 355
+D G T L PP P +QCPR+ G+
Sbjct: 448 IDAGKGTPLAPP-PQAQCPRQPGW 470
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 284 VDCGDRTELQPPKPNSQCPRRNGF 355
+D G T L PP P +QCPR+ G+
Sbjct: 450 IDAGKGTPLAPP-PQAQCPRQPGW 472
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 2/124 (1%)
Frame = +3
Query: 120 PNSSAPLKTASMKTTDNATSSSNVS-MESPQPSS-ARTVLCSTLLSGRXXXXXXXXXXXX 293
P ++ TAS TT+ +TS+ S SP S+ + ST ++
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSS 487
Query: 294 XIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 473
+ +++ PS + P++ S P T + SST + T + T +
Sbjct: 488 TVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSD 547
Query: 474 GPIP 485
G P
Sbjct: 548 GTNP 551
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 2/124 (1%)
Frame = +3
Query: 120 PNSSAPLKTASMKTTDNATSSSNVS-MESPQPSS-ARTVLCSTLLSGRXXXXXXXXXXXX 293
P ++ TAS TT+ +TS+ S SP S+ + ST ++
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSS 487
Query: 294 XIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 473
+ +++ PS + P++ S P T + SST + T + T +
Sbjct: 488 TVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSD 547
Query: 474 GPIP 485
G P
Sbjct: 548 GTNP 551
>Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical
protein T07C4.2 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 126 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGR 257
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 126 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIGL 305
SS+P+ + S T + +S S++S ++PQ SS T + SG I
Sbjct: 965 SSSPIPSTSQNTNPSTSSGSSMSTQTPQ-SSQSTSPVESSTSGATSSSGSPGTTLTSI-- 1021
Query: 306 NSSPPSPTHNVPAAMDSL-PIPTPLCATSSTT 398
S PSP+ + ++ S P+ + + S+ T
Sbjct: 1022 -SPSPSPSSTIGSSQGSTSPVVSTISQGSTET 1052
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +3
Query: 126 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIGL 305
S+ P T +M +T + T S +S ES +S + ST+ G +
Sbjct: 1918 STVPSSTGTMGSTSSGTVGSTIS-ESSTAASTSSQTGSTVTIGSTSGTNPSSPRS--LSQ 1974
Query: 306 NSSPPSPTHNVPAAMDSLPIPTPLCATSSTTA 401
+ PSP+ + + SLP +P +T S ++
Sbjct: 1975 ITITPSPSQSTESTQTSLPSSSPSPSTHSVSS 2006
>AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box
transcription factor TBX-8 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 126 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGR 257
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.4
Identities = 27/121 (22%), Positives = 39/121 (32%)
Frame = +3
Query: 126 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIGL 305
S+ P A+ + TS +N +P S+ S S G
Sbjct: 584 STTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHVEPASVAGGSQAG- 642
Query: 306 NSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 485
S PS A DS IP+ A + T + T + TP P++ P
Sbjct: 643 -SRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPSTSVPP 701
Query: 486 P 488
P
Sbjct: 702 P 702
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXX 293
Q+P S+ P +++S SSS SP S+ T S+ ++ +
Sbjct: 923 QSPTSAQPAQSSSTSAATVTVSSSQSPTSSPAQQSS-TPAGSSTVTVQQSSSFQSPQSTT 981
Query: 294 XIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSST 395
IG SS P+ P++ P T +C T
Sbjct: 982 QIG--SSTTVPSTQAPSSTSGGPTTTQICPNQQT 1013
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 299 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEV 424
+ ++ PKPN G+F H SV + F+ GE +V
Sbjct: 311 KRDMTSPKPNDDDGTLMGYFRHGYQSVADFFHRKTVGEEEQV 352
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 444 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 560
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 459 PVPASGPIPPEDKDVTNNKKKQ 524
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 459 PVPASGPIPPEDKDVTNNKKKQ 524
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 444 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 560
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 442
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 443 HFDE 454
H D+
Sbjct: 2118 HDDD 2121
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 442
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 443 HFDE 454
H D+
Sbjct: 2702 HDDD 2705
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 442
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 443 HFDE 454
H D+
Sbjct: 2118 HDDD 2121
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 442
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 443 HFDE 454
H D+
Sbjct: 2702 HDDD 2705
>U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical
protein M03F4.7b protein.
Length = 91
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 80 VFIVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFE 187
+F+ L A A+AS P+KDG++ ++ DK ++
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 80 VFIVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFE 187
+F+ L A A+AS P+KDG++ ++ DK ++
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 447 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 572
+T T P S P P + K++ S P+ L+PKD
Sbjct: 120 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 161
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 447 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 572
+T T P S P P + K++ S P+ L+PKD
Sbjct: 215 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 256
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 447 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 572
+T T P S P P + K++ S P+ L+PKD
Sbjct: 198 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 239
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 191 VDGVATTKLCPDGLVFDPTIRKINKCDQP---FNVDCGDRTELQPPKPNSQCPRR 346
+ G+ T + PD +PT K + C P F+ T QPP+P PRR
Sbjct: 622 LSGIDTKRKVPD----EPTTSKRDACCSPVREFDDQQHQFTSSQPPQPAESSPRR 672
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 80 VFIVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFE 187
+F+ L A A+AS P+KDG++ ++ DK ++
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 442
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 443 HFDE 454
H D+
Sbjct: 2702 HDDD 2705
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,528,693
Number of Sequences: 27780
Number of extensions: 384217
Number of successful extensions: 1856
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1841
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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