Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1457
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   2.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.5  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   4.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   5.9  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 73  RFEFELCHPATRFSHDHTS*RAGE 2
           R+ F   +P T F H HT  + G+
Sbjct: 409 RYTFRADNPGTHFWHSHTGMQRGD 432


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 32   RESGGRMAELEFEAPLAQIE 91
            RE+ G+M  LEFE  L  IE
Sbjct: 999  REAEGKMKRLEFEQILQTIE 1018


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 215 INDNEEPRLVKCKQDNMQNGEGDN 286
           ++ N+ P+  KC QD M    G N
Sbjct: 139 LDKNDLPKATKCSQDLMAKVVGQN 162


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 232 FFVVIYFVGISFSFDHFTF 176
           F  +++FV  SFSF  F+F
Sbjct: 57  FMFLLHFVLFSFSFPFFSF 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,863
Number of Sequences: 2352
Number of extensions: 8503
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)