Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1457
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical p... 81 3e-16
Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical p... 81 3e-16
U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein. 81 3e-16
U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein. 81 3e-16
U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein. 81 3e-16
U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine rec... 33 0.089
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 29 1.4
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 29 1.4
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 29 1.4
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 29 2.5
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 29 2.5
AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical ... 28 3.3
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 28 4.4
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 5.8
U00033-8|AAC48294.1| 315|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical
protein C01G10.11a protein.
Length = 378
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +2
Query: 269 NGEGDNFTETFCGSLEDLVNTFDEKITKCFGNYEENV*KLAPVQVRSQEEIMNECQMWWT 448
N + + + F GSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 41 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 100
Query: 449 MTGN 460
+TGN
Sbjct: 101 LTGN 104
>Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical
protein C01G10.11b protein.
Length = 369
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +2
Query: 269 NGEGDNFTETFCGSLEDLVNTFDEKITKCFGNYEENV*KLAPVQVRSQEEIMNECQMWWT 448
N + + + F GSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 41 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 100
Query: 449 MTGN 460
+TGN
Sbjct: 101 LTGN 104
>U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein.
Length = 376
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +2
Query: 269 NGEGDNFTETFCGSLEDLVNTFDEKITKCFGNYEENV*KLAPVQVRSQEEIMNECQMWWT 448
N + + + F GSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 48 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 107
Query: 449 MTGN 460
+TGN
Sbjct: 108 LTGN 111
>U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein.
Length = 379
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +2
Query: 269 NGEGDNFTETFCGSLEDLVNTFDEKITKCFGNYEENV*KLAPVQVRSQEEIMNECQMWWT 448
N + + + F GSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 42 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 101
Query: 449 MTGN 460
+TGN
Sbjct: 102 LTGN 105
>U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein.
Length = 385
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +2
Query: 269 NGEGDNFTETFCGSLEDLVNTFDEKITKCFGNYEENV*KLAPVQVRSQEEIMNECQMWWT 448
N + + + F GSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 48 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 107
Query: 449 MTGN 460
+TGN
Sbjct: 108 LTGN 111
>U53139-11|AAK18936.2| 353|Caenorhabditis elegans Serpentine
receptor, class w protein71 protein.
Length = 353
Score = 33.5 bits (73), Expect = 0.089
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -1
Query: 319 IFKRTAESLSEIIPFAVLHVVLFTLHQSRFFVVIYFVGISFSFDHFTFQIVYVVKDVI-- 146
+ K + +L I F L +V T+ Q+R+ IYF + D +TF+++ + D +
Sbjct: 50 MMKHSTNTLIIAIGFCDL-IVFLTIAQNRYRYFIYFDFDCINMDGYTFRLMQWIGDSLND 108
Query: 145 AVDRLLGKVGCRKAIIRFFYLRQRRFEFELCH 50
A R +G A+IRF ++ +L H
Sbjct: 109 AFKRCSFWLGVALAMIRFLIMKLPNKSSQLSH 140
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = -1
Query: 307 TAESLSEIIPFAVLHVVLFTLHQSRFFVVIYFVGISFSFDHFTFQI-VYVVKDVIAVDRL 131
T E L ++I F + + ++R +I +GI++ HF FQ+ Y + RL
Sbjct: 1300 TLECLLKMIAFTLSG--FWQSRRNRIDFIITILGINWIVFHFLFQLPAYFAGGITEWKRL 1357
Query: 130 LGKVGCRKAIIRFFYLRQRR 71
G I+RFF + R+
Sbjct: 1358 TYTYGYLVVILRFFTIAGRK 1377
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = -1
Query: 307 TAESLSEIIPFAVLHVVLFTLHQSRFFVVIYFVGISFSFDHFTFQI-VYVVKDVIAVDRL 131
T E L ++I F + + ++R +I +GI++ HF FQ+ Y + RL
Sbjct: 1278 TLECLLKMIAFTLSG--FWQSRRNRIDFIITILGINWIVFHFLFQLPAYFAGGITEWKRL 1335
Query: 130 LGKVGCRKAIIRFFYLRQRR 71
G I+RFF + R+
Sbjct: 1336 TYTYGYLVVILRFFTIAGRK 1355
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = -1
Query: 307 TAESLSEIIPFAVLHVVLFTLHQSRFFVVIYFVGISFSFDHFTFQI-VYVVKDVIAVDRL 131
T E L ++I F + + ++R +I +GI++ HF FQ+ Y + RL
Sbjct: 1300 TLECLLKMIAFTLSG--FWQSRRNRIDFIITILGINWIVFHFLFQLPAYFAGGITEWKRL 1357
Query: 130 LGKVGCRKAIIRFFYLRQRR 71
G I+RFF + R+
Sbjct: 1358 TYTYGYLVVILRFFTIAGRK 1377
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 242 VKCKQDNMQNGEGDNFTETFCGSLEDLVNTFDEKITKC 355
V QD G GD F + +CGSL +VN + + C
Sbjct: 524 VSIPQDKYNTG-GDQFCDGWCGSLNSVVNGKNATVYYC 560
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 242 VKCKQDNMQNGEGDNFTETFCGSLEDLVNTFDEKITKC 355
V QD G GD F + +CGSL +VN + + C
Sbjct: 524 VSIPQDKYNTG-GDQFCDGWCGSLNSVVNGKNATVYYC 560
>AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical
protein Y24D9A.2 protein.
Length = 568
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 200 TDSNKINDNEEPRLVKCKQDNMQNGEGDNFTETFCGSLEDLVNTFDEKITKCF 358
TD N ++ EP L K + +NGE N C S + +V ++ + CF
Sbjct: 244 TDVNMVDQFTEPNLTKAIIMSEENGE--NMIRCTCCSSKPIVPCYENEKCPCF 294
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -1
Query: 379 NVLLIVSETFRDFLIEGVHQIFKRTAESLSEIIPFAVLHVVLFTLHQSRFFVVIYFVGIS 200
N L +S F F++ + ++ + L+ +I FA+ + L+ RF +
Sbjct: 420 NFALSLSFFFAYFVVSYAYTAPRKISHILTILIGFAICILELYGPSNQRFPHIYQLANAF 479
Query: 199 FSFDHFTFQIVYV 161
FS HF + ++Y+
Sbjct: 480 FSCVHFIYFLLYL 492
>AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical
protein F54D7.2 protein.
Length = 393
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -1
Query: 328 VHQIFKRTAESLSEIIPFAVL---HVVLFTLHQSRFFVVIYFVGISFSFDHFTFQIVYV 161
+ IF R S+S + VL +V FT H ++ I F+ ++ F IVY+
Sbjct: 150 IFSIFGRGRFSISSVELLCVLISTQIVFFTTHWEKYNTGIMFLSWAYDVSQFGLVIVYL 208
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
protein F46C3.3 protein.
Length = 2557
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 178 FQIVYVVKDVIAVDRLLGKVGCRKAIIRFFYLRQRRFEFELCHPATRFSH 29
F I Y V ++ D + K G K + +FFY+ Q + H RF H
Sbjct: 183 FNIFYEVYHGLS-DEMKAKFGI-KGLQKFFYINQGNSSENIQHDVNRFKH 230
>U00033-8|AAC48294.1| 315|Caenorhabditis elegans Hypothetical
protein F37C12.2 protein.
Length = 315
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -1
Query: 340 LIEGVHQIFKRTAESLSEIIPFAVLHVVLFTLH----QSRFFVVIYFVGISFSF 191
LI +HQIF LS+ +P ++ V+ LH S + +F G + SF
Sbjct: 162 LISALHQIFFLIQGMLSQYLPIPLITPVIVYLHMALLNSMYCFDYFFDGYNLSF 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,046
Number of Sequences: 27780
Number of extensions: 200075
Number of successful extensions: 679
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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