Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1453
         (360 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0313 + 17404002-17406410                                         29   1.5  
02_05_0529 + 29802027-29802281,29802468-29802641,29802755-298028...    29   1.5  

>12_02_0313 + 17404002-17406410
          Length = 802

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 320 ARTYGELLFI*KLN*WDETRHXXXXXXRGSNDEIASPLCLTYCSL 186
           ART G LLF   ++ W E +           D+I S L L+Y +L
Sbjct: 364 ARTLGSLLFRKDISMWQEVKENNLLSTGKGKDDILSVLKLSYDAL 408


>02_05_0529 +
           29802027-29802281,29802468-29802641,29802755-29802847,
           29802921-29802989,29803231-29803437,29803754-29803879,
           29803996-29804148
          Length = 358

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 255 PEPIESRFKRRNCQPIVPD 199
           P P  +RFK  N +P++PD
Sbjct: 135 PRPANTRFKELNSEPVIPD 153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,832,804
Number of Sequences: 37544
Number of extensions: 159112
Number of successful extensions: 279
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)