Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1440
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC006644-5|AAF39834.1| 786|Caenorhabditis elegans Hypothetical ... 29 5.0
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81529-3|CAB04300.1| 224|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81529-1|CAB04294.1| 224|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 306 CSRCSSHRRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGC 431
C RC + R TR C R CCC C C CGC
Sbjct: 97 CRRCCTCCRTCC--CTRCCTCCRPCCC-----GCGCGCGCGC 131
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 351 TRSCDVLRACCC*GDRSRCSLRCTCGC 431
TR C R CCC C C CGC
Sbjct: 92 TRCCTCCRPCCC-----GCGCGCGCGC 113
>AC006644-5|AAF39834.1| 786|Caenorhabditis elegans Hypothetical
protein F55A3.2 protein.
Length = 786
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 156 YWPSIFVRRCTIVRLCRISGCDQDHFSSCFLSIFLLVHNRSWITIFR 296
YW SIF+R C I LC+ + +S F H + IT F+
Sbjct: 589 YWLSIFLRSCGIDWLCKSNNICSAAWSLVFRDSNKTSHQQYAITYFK 635
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 154 HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGH 59
+M M+ ++ +R+Q++ W RL QH ++ H
Sbjct: 685 NMGMISEEMRRKQDEMWLDLRLTQHIKKHSSH 716
>Z81529-3|CAB04300.1| 224|Caenorhabditis elegans Hypothetical
protein F35E8.4 protein.
Length = 224
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 159 WPSIFVRRC-TIVRLCRISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNILCSRCSSHR 329
W ++ + C + C GC D + C LSI L V + ++ + C RCS+
Sbjct: 115 WRTVIAQDCPSACGFCNEGGC-VDAITDCGDDLSICLNVKMQDFVNQYCQKTCKRCSAAT 173
Query: 330 RILRPRYTRSCDV 368
+ P T +C V
Sbjct: 174 TV-APPVTNNCTV 185
>Z81529-1|CAB04294.1| 224|Caenorhabditis elegans Hypothetical
protein F35E8.1 protein.
Length = 224
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 159 WPSIFVRRC-TIVRLCRISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNILCSRCSSHR 329
W ++ + C + C GC D + C LSI L V + ++ + C RCS+
Sbjct: 115 WRTVIAQDCPSACGFCNEGGC-VDAITDCGDDLSICLNVKMQDFVNQYCQKTCKRCSAAT 173
Query: 330 RILRPRYTRSCDV 368
+ P T +C V
Sbjct: 174 TV-APPVTNNCTV 185
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 6.7
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 201 CRIS-GCDQDHFSSCF---LSIFLLVHNRSWITIFRNILCSRCSSHRRILRPRYTRSCDV 368
C IS G + + SC LS + R W TIFR+I R + ++L RYT D
Sbjct: 190 CAISLGEMIEFYDSCVRLNLSFNKQIDMRGWTTIFRSI---RHAVSLQMLNLRYTNLNDR 246
Query: 369 LRACCC*GDRSRCSLRCTCGCLQDHQSCSIFCVILL 476
C R++ S TC L++ Q ++L+
Sbjct: 247 SIPALCKMARAQPSASLTCLHLENTQMSGKNLLVLI 282
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 6.7
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 201 CRIS-GCDQDHFSSCF---LSIFLLVHNRSWITIFRNILCSRCSSHRRILRPRYTRSCDV 368
C IS G + + SC LS + R W TIFR+I R + ++L RYT D
Sbjct: 190 CAISLGEMIEFYDSCVRLNLSFNKQIDMRGWTTIFRSI---RHAVSLQMLNLRYTNLNDR 246
Query: 369 LRACCC*GDRSRCSLRCTCGCLQDHQSCSIFCVILL 476
C R++ S TC L++ Q ++L+
Sbjct: 247 SIPALCKMARAQPSASLTCLHLENTQMSGKNLLVLI 282
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 6.7
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 201 CRIS-GCDQDHFSSCF---LSIFLLVHNRSWITIFRNILCSRCSSHRRILRPRYTRSCDV 368
C IS G + + SC LS + R W TIFR+I R + ++L RYT D
Sbjct: 190 CAISLGEMIEFYDSCVRLNLSFNKQIDMRGWTTIFRSI---RHAVSLQMLNLRYTNLNDR 246
Query: 369 LRACCC*GDRSRCSLRCTCGCLQDHQSCSIFCVILL 476
C R++ S TC L++ Q ++L+
Sbjct: 247 SIPALCKMARAQPSASLTCLHLENTQMSGKNLLVLI 282
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 6.7
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 201 CRIS-GCDQDHFSSCF---LSIFLLVHNRSWITIFRNILCSRCSSHRRILRPRYTRSCDV 368
C IS G + + SC LS + R W TIFR+I R + ++L RYT D
Sbjct: 190 CAISLGEMIEFYDSCVRLNLSFNKQIDMRGWTTIFRSI---RHAVSLQMLNLRYTNLNDR 246
Query: 369 LRACCC*GDRSRCSLRCTCGCLQDHQSCSIFCVILL 476
C R++ S TC L++ Q ++L+
Sbjct: 247 SIPALCKMARAQPSASLTCLHLENTQMSGKNLLVLI 282
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 91 LEQHRRQRCGHRERCELSKKRP 26
+E HRR+RC ++RC + + P
Sbjct: 320 VECHRRRRCSRKQRCHTTTQPP 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.126 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,066,225
Number of Sequences: 27780
Number of extensions: 226541
Number of successful extensions: 827
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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