Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1438
         (584 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0402 - 18627565-18628137,18628343-18628479,18628513-186286...    29   3.6  
05_04_0438 + 21244735-21244782,21245089-21245274,21245307-212453...    27   8.3  

>02_03_0402 -
           18627565-18628137,18628343-18628479,18628513-18628603,
           18629734-18629817
          Length = 294

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 153 KIIIKKSELNVAQTNYPTNIDIINVSSFICE 61
           K  ++KSE+N+   N    +DI+N+S+ + E
Sbjct: 46  KAELRKSEVNLNTVNRDVLVDIVNISNIVLE 76


>05_04_0438 +
           21244735-21244782,21245089-21245274,21245307-21245384,
           21245385-21245678,21246137-21246262,21246935-21247168,
           21247534-21248061
          Length = 497

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 314 DIVLRSQYSHNGCPTLQTETH 252
           D++ RS   H   P  QTETH
Sbjct: 477 DVIRRSASGHEAAPPFQTETH 497


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,873,180
Number of Sequences: 37544
Number of extensions: 285127
Number of successful extensions: 536
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)