Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1435
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   2.1  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   2.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.4  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -2

Query: 534 RRSRMQ*RPACCSPFRLAASQFCPKHWTNSRIQQNTRRPRMQKN 403
           RR+R   +P C +   +    FC ++W + R+     R + +++
Sbjct: 165 RRNRRDRQPCCSTLLCVVVVPFCCRYWHSLRLSYACYRAKHRQD 208


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -2

Query: 606 RTPHQRPCGTVGKRRKRRPPKQIW--RRSRM 520
           R    RP  T   RR  RPP   W  RRSR+
Sbjct: 11  RASPSRPILTTRGRRWPRPPTSCWPSRRSRL 41


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 285 HSYMHLCHHYRRNGPSHQNQYASPWMICSPL 193
           HS  H  HH+  + P H  Q  S    C P+
Sbjct: 180 HSQHH--HHHHHHHPHHSQQQHSASPRCYPM 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,715
Number of Sequences: 2352
Number of extensions: 14990
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)