Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1435
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40417-10|AAA81418.2| 247|Caenorhabditis elegans Synaptogyrin f... 93 1e-19
AF079373-1|AAC27798.1| 247|Caenorhabditis elegans synaptogyrin ... 93 1e-19
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.9
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 28 5.0
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 28 5.0
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 28 5.0
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 28 5.0
AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006697-1|AAF60390.2| 278|Caenorhabditis elegans Hypothetical ... 28 5.0
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 6.7
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 28 6.7
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 28 6.7
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 28 6.7
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 28 6.7
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 28 6.7
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 28 6.7
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 28 6.7
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 28 6.7
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 28 6.7
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 28 6.7
AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical ... 27 8.8
>U40417-10|AAA81418.2| 247|Caenorhabditis elegans Synaptogyrin
family protein 1 protein.
Length = 247
Score = 93.5 bits (222), Expect = 1e-19
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Frame = +3
Query: 120 FDPQAFIQRPHVIVRAVCWLFSVIVMGCISSKGWRTDSDG-KDHCVYNDDTNACNYGVGI 296
FD F ++P V+ R LF +I+ +S GW SD C+Y ++ C++ +
Sbjct: 16 FDKNTFFKKPTVLFRCAALLFGLILWYSVSKGGWHKPSDAIHPVCLYGRSSSTCSFATAV 75
Query: 297 SVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFLYFVG-FCYLS--NAW- 464
A ++ IV + +Q+SSV TR+ VLADL SA + ++ +G F + S +A+
Sbjct: 76 GFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAIFLIGFFTFWSKLSAFE 135
Query: 465 -GKTEKPPIGTANNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 620
+ ++ PI T NN + I S AW AFFA++R+ G A P Y+
Sbjct: 136 VDEDDENPIKT-NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187
>AF079373-1|AAC27798.1| 247|Caenorhabditis elegans synaptogyrin
homolog protein.
Length = 247
Score = 93.5 bits (222), Expect = 1e-19
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Frame = +3
Query: 120 FDPQAFIQRPHVIVRAVCWLFSVIVMGCISSKGWRTDSDG-KDHCVYNDDTNACNYGVGI 296
FD F ++P V+ R LF +I+ +S GW SD C+Y ++ C++ +
Sbjct: 16 FDKNTFFKKPTVLFRCAALLFGLILWYSVSKGGWHKPSDAIHPVCLYGRSSSTCSFATAV 75
Query: 297 SVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFLYFVG-FCYLS--NAW- 464
A ++ IV + +Q+SSV TR+ VLADL SA + ++ +G F + S +A+
Sbjct: 76 GFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAIFLIGFFTFWSKLSAFE 135
Query: 465 -GKTEKPPIGTANNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 620
+ ++ PI T NN + I S AW AFFA++R+ G A P Y+
Sbjct: 136 VDEDDENPIKT-NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = -2
Query: 636 RSRPPLRMPERTPHQRPCGTVGKRRKRRPPKQIWRR-SRMQ*RPACCSPFRLAASQFCPK 460
R R P+R P +P +R ++R R PP++ R S + R SP R + S P
Sbjct: 79 RKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRS---PP 135
Query: 459 HWTNSRIQQNTRRPRMQKNLSQP 391
SR + R R Q++ S P
Sbjct: 136 RRQVSRSRSPPPR-RQQRSRSPP 157
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 319 EAMNAMTDIPTP*LHAFVSSL*TQWSFPSESVRQPLDDMQPITITLNSQHTALTIT 152
E ++A T +P P H+ SSL P + + P+T+ L++ TALT T
Sbjct: 696 EPLSAPTSVPLPANHS--SSLFEDIKAPKATYSRKTPSNIPLTVPLSTAATALTTT 749
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 319 EAMNAMTDIPTP*LHAFVSSL*TQWSFPSESVRQPLDDMQPITITLNSQHTALTIT 152
E ++A T +P P H+ SSL P + + P+T+ L++ TALT T
Sbjct: 464 EPLSAPTSVPLPANHS--SSLFEDIKAPKATYSRKTPSNIPLTVPLSTAATALTTT 517
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 319 EAMNAMTDIPTP*LHAFVSSL*TQWSFPSESVRQPLDDMQPITITLNSQHTALTIT 152
E ++A T +P P H+ SSL P + + P+T+ L++ TALT T
Sbjct: 696 EPLSAPTSVPLPANHS--SSLFEDIKAPKATYSRKTPSNIPLTVPLSTAATALTTT 749
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 RPHVI-VRAVCWLFSVIVMGCISSKGWRTDSDGKDHCVYNDDTNACNYGVGISVIAFIAS 320
R H + + + + +VM I +G +T G+D CV + T +CN + ++ + +
Sbjct: 332 RKHFLALHRIIGAYDPVVMAKIKREGCKTVL-GRDRCVEKEITESCNSELAVNFGKHLLA 390
Query: 321 VAFIVG 338
+ I+G
Sbjct: 391 LHKIIG 396
>AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical
protein Y119C1B.12 protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 407 FCILGLLVFCWILLFVQCLGQ 469
+CILGL+VF +LL V C+ +
Sbjct: 143 YCILGLIVFAILLLVVCCVAR 163
>AC006697-1|AAF60390.2| 278|Caenorhabditis elegans Hypothetical
protein W09B7.3 protein.
Length = 278
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 RPHVI-VRAVCWLFSVIVMGCISSKGWRTDSDGKDHCVYNDDTNACNYGVGISVIAFIAS 320
R H + + + + +VM I +G +T G+D CV + T +CN + ++ + +
Sbjct: 209 RKHFLALHRIIGAYDPVVMAKIKREGCKTVL-GRDRCVEKEITESCNSELAVNFGKHLLA 267
Query: 321 VAFIVG 338
+ I+G
Sbjct: 268 LHKIIG 273
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 649 PPGLPIAPSTSYAGANAASAPM-RNRWKAKKAQATQANMEKKQNAIAPCMLFAVPIGGFS 473
P P+APS G AA+AP + AKK + + E + AP P +
Sbjct: 433 PEAAPVAPSADAGGYAAAAAPAGGGSYPAKKRRVARDYAEGEAAPAAPAEPAPAPAPAPA 492
Query: 472 VLPQA 458
P+A
Sbjct: 493 PAPEA 497
>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform f protein.
Length = 1418
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1016 RVHSWSGLCHHFNPNCPVH 1034
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1016 RVHSWSGLCHHFNPNCPVH 1034
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1016 RVHSWSGLCHHFNPNCPVH 1034
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1064 RVHSWSGLCHHFNPNCPVH 1082
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1023 RVHSWSGLCHHFNPNCPVH 1041
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1023 RVHSWSGLCHHFNPNCPVH 1041
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1016 RVHSWSGLCHHFNPNCPVH 1034
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1064 RVHSWSGLCHHFNPNCPVH 1082
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1016 RVHSWSGLCHHFNPNCPVH 1034
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 291 RHHSYMHLCHHYRRNGPSH 235
R HS+ LCHH+ N P H
Sbjct: 1016 RVHSWSGLCHHFNPNCPVH 1034
>AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical
protein T25D3.4 protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 203 AAHYNHAEQPTYRPDDHMRPLNKSLRVKRASS 108
AAH N+++ P PDD + P + L K S
Sbjct: 11 AAHSNNSQLPKVNPDDRLSPNTRVLITKLEDS 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,786,421
Number of Sequences: 27780
Number of extensions: 338377
Number of successful extensions: 1054
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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