Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1433
         (355 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC...    29   1.7  
AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB...    29   1.7  
AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-...    29   1.7  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    27   6.9  

>AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC,
            isoform C protein.
          Length = 1453

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 83   GRLAYS--PPDGEWLPSPMDFSNARGRAKPLPLATGVEYIWN 202
            G  AY+  PP     P P+  + A G   PLPL  GV  +W+
Sbjct: 1296 GNSAYTCPPPPSVAFPFPVPIAPASGSV-PLPLEPGVSNVWS 1336


>AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB,
            isoform B protein.
          Length = 1853

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 83   GRLAYS--PPDGEWLPSPMDFSNARGRAKPLPLATGVEYIWN 202
            G  AY+  PP     P P+  + A G   PLPL  GV  +W+
Sbjct: 1296 GNSAYTCPPPPSVAFPFPVPIAPASGSV-PLPLEPGVSNVWS 1336


>AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-like
            protein.
          Length = 1463

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 83   GRLAYS--PPDGEWLPSPMDFSNARGRAKPLPLATGVEYIWN 202
            G  AY+  PP     P P+  + A G   PLPL  GV  +W+
Sbjct: 1296 GNSAYTCPPPPSVAFPFPVPIAPASGSV-PLPLEPGVSNVWS 1336


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 277  EARSI*CGWYVVKVNFGKLLLVNSAIPDVLYSGGKR 170
            E   I CG+  +   F KLLL+ S  PD   S  K+
Sbjct: 3998 ENEEIPCGYNAILDGFRKLLLIRSWCPDRTISQAKK 4033


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,154,660
Number of Sequences: 53049
Number of extensions: 383732
Number of successful extensions: 934
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)