Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1428
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071422-1|AAL49044.1|  318|Drosophila melanogaster RE50056p pro...    30   3.5  
AE014298-1937|AAF48299.1|  340|Drosophila melanogaster CG11164-P...    30   3.5  
AE014134-630|AAF51090.1|  807|Drosophila melanogaster CG15415-PA...    29   6.2  

>AY071422-1|AAL49044.1|  318|Drosophila melanogaster RE50056p
           protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 211 WVRHEISQMTEELLALFEPRETWFSDAEVQTSVQSY 318
           ++ H   +M E L+A  EPR +WF D+EV ++ + Y
Sbjct: 43  FITHPDGRMME-LVAFTEPRRSWFVDSEVCSNGRIY 77


>AE014298-1937|AAF48299.1|  340|Drosophila melanogaster CG11164-PA
           protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 211 WVRHEISQMTEELLALFEPRETWFSDAEVQTSVQSY 318
           ++ H   +M E L+A  EPR +WF D+EV ++ + Y
Sbjct: 65  FITHPDGRMME-LVAFTEPRRSWFVDSEVCSNGRIY 99


>AE014134-630|AAF51090.1|  807|Drosophila melanogaster CG15415-PA
           protein.
          Length = 807

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 286 LKTKFPS-AQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           LKT  P     A  +P SS + H  P+T+ KSAAE
Sbjct: 448 LKTALPRIVSVAAQSPSSSAQLHTHPETSLKSAAE 482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,133,917
Number of Sequences: 53049
Number of extensions: 681145
Number of successful extensions: 1971
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)