Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1422
(460 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1605 - 28166338-28166418,28166496-28166567,28166655-281667... 31 0.45
03_03_0137 - 14759337-14759508,14759616-14759813,14759917-147601... 31 0.45
02_04_0610 + 24335153-24337724,24337835-24338256 29 1.4
05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522... 29 1.8
03_01_0111 + 884501-884970,885069-885147,885530-885574,885838-88... 29 1.8
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 29 2.4
01_04_0141 + 16618916-16619265,16619400-16619418 29 2.4
06_03_0213 - 18063536-18063707,18063786-18064186,18064317-18064706 28 3.1
02_01_0722 + 5405550-5405810,5406654-5407399,5407575-5408046,540... 28 4.2
01_05_0621 + 23756682-23757075,23757530-23757726,23757825-23758139 28 4.2
03_05_0164 - 21432289-21432355,21433612-21433699,21433859-214339... 27 5.5
01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 27 5.5
06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101 27 7.3
03_05_0116 + 20978298-20978621,20979272-20979364 27 7.3
02_05_1257 + 35286153-35286599,35286679-35287229,35287608-352878... 27 7.3
01_01_0361 + 2838979-2841745,2841897-2842285 27 7.3
12_02_0560 - 20486368-20487159 27 9.6
12_02_0215 - 15794278-15795069 27 9.6
08_01_0931 + 9177466-9177493,9178205-9178317,9178418-9178759,917... 27 9.6
07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 27 9.6
06_02_0115 - 12016114-12016905 27 9.6
05_03_0298 - 11944750-11945541 27 9.6
02_03_0397 + 18574277-18574618,18574740-18574848,18574854-18575872 27 9.6
>08_02_1605 -
28166338-28166418,28166496-28166567,28166655-28166771,
28166846-28166956,28167077-28167252,28167340-28167421,
28167662-28167808,28167887-28168252,28168558-28168741,
28169104-28169213,28169452-28169508,28169589-28169600,
28169899-28169961,28170010-28170057,28170166-28170246,
28170326-28170389,28170661-28170686,28170782-28170868,
28170942-28170969,28171194-28171255,28171364-28171576,
28171667-28171774,28171948-28172022,28172136-28172249,
28172597-28172644,28172688-28172767,28172974-28173049,
28173287-28173427,28173685-28173762,28175100-28175204,
28177061-28177147,28177287-28178579
Length = 1463
Score = 31.1 bits (67), Expect = 0.45
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 171 VAEWSSSLARAGTSGAWCRSPWPG 242
V++W+SSLA+ WCR W G
Sbjct: 217 VSQWASSLAQVAYIMGWCREGWRG 240
>03_03_0137 -
14759337-14759508,14759616-14759813,14759917-14760116,
14760197-14760310,14760386-14760572,14760984-14761225,
14762326-14762424,14762505-14762836,14762931-14763039
Length = 550
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 165 TVVAEWSSSLARAGTSGAWCRSPWPGRTNADVTPAI 272
TVV E SS+ +G GAW R W G + V PA+
Sbjct: 36 TVVGEGSSTSPGSG-GGAWWREAWVGARSRAVAPAL 70
>02_04_0610 + 24335153-24337724,24337835-24338256
Length = 997
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 168 VVAEWSSSLARAGTSGAWCRSPWPGRTNA 254
V++ W++S+ +G WC PGR A
Sbjct: 44 VLSNWNTSIHLCSWNGVWCSPKHPGRVTA 72
>05_06_0273 -
26851077-26851167,26851433-26851869,26852125-26852271,
26852352-26854415,26854792-26854908,26855007-26855093,
26855350-26855439,26855523-26855609,26856736-26856810
Length = 1064
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 240 LATESDTRPLRYQLSPNLKTIPPPLSPLQTDVPSLYPAQ*VYSDV 106
LAT S P++YQ + N++ P P+ S PA + D+
Sbjct: 722 LATTSPAEPVKYQETKNVRNETKPADPMSMMKASQVPAMLQFKDM 766
>03_01_0111 +
884501-884970,885069-885147,885530-885574,885838-885903,
886362-886420,886626-886701,886825-886956,887046-887153,
887679-887733,887822-888042
Length = 436
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 39 WWRCPWLTLKPASGLTANSSSDLHRSTLTAPDIE---MEHRSVTATVVAEWSSSLARAGT 209
WW C LT LT + ++T P+IE +E R++++T +A S R
Sbjct: 157 WWACIALTSLLIRTLTVPLLLNQMKATAMRPEIEAINLEMRTISSTRIAGNEKSSTRVTD 216
Query: 210 SGAWCRSP 233
G+ P
Sbjct: 217 EGSMSTDP 224
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 179 MVFKFGESWYLRGLVSLSVARQNECRCDPSHYVVFSDLAKFLPWLQENLF 328
+V S+ L GLV +SV N P H++ DL PW++ F
Sbjct: 137 IVLVAARSYGLTGLVRISVKEHNVIESKPDHFL--DDLRLHNPWVELKQF 184
>01_04_0141 + 16618916-16619265,16619400-16619418
Length = 122
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 125 CAGYRDGTSVCNGDS-GGGMVFKFGESWYLRGLVSLSVARQNEC 253
C G+RDG C+G GGG + R S +ARQ EC
Sbjct: 45 CNGWRDGGDRCDGQRLGGGDCDSGADQCDGRRGTSSRMARQREC 88
>06_03_0213 - 18063536-18063707,18063786-18064186,18064317-18064706
Length = 320
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 66 KPASGLTANSSSDLHRSTLTAPDIEMEHR--SVTATVVAEWSSSLAR 200
+PAS +A + D HR TL P + R V A+++A W L +
Sbjct: 116 RPASAPSAPPAQDRHRITLDKPKAKGRGRGGKVQASLLAPWELDLGK 162
>02_01_0722 +
5405550-5405810,5406654-5407399,5407575-5408046,
5408129-5408296,5408301-5408418,5408845-5409056,
5409165-5409287,5409395-5409880,5409976-5410401
Length = 1003
Score = 27.9 bits (59), Expect = 4.2
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -1
Query: 274 VMAGVTSAFVLPGHGERHQAPEVPALAKLEDHSATTVAVTDRCSI-----SISGAVSVLR 110
V A V VL G+ Q EVP +++E H + T + C + +I GA+SV
Sbjct: 743 VSANVEGKLVLVGNKRLMQEFEVPISSEVEGHMSETEELARTCVLVAIDRTICGALSV-- 800
Query: 109 CKSDEEFAVRPDAGFSVNH 53
SD ++P+AG ++++
Sbjct: 801 --SD---PLKPEAGRAISY 814
>01_05_0621 + 23756682-23757075,23757530-23757726,23757825-23758139
Length = 301
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 128 AGYRDGTSVCNGDSGGG 178
AG+RD T +C+G GGG
Sbjct: 24 AGHRDTTMLCDGGDGGG 40
>03_05_0164 -
21432289-21432355,21433612-21433699,21433859-21433954,
21434284-21434563
Length = 176
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 198 SPNLKTIPPPLSPLQTDVPSLYPA 127
+P+ +PPPLSP T +P P+
Sbjct: 20 APHALALPPPLSPSTTRIPQRRPS 43
>01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942
Length = 1020
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 159 TATVVAEWSSSLARAGTSGAWCRSPWPGRTNA 254
+++ +A W++S + G G C WP R A
Sbjct: 41 SSSALASWNTSASFCGWEGVTCSHRWPTRVAA 72
>06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101
Length = 114
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 240 LATESDTRPLRYQLSPNLKTIPPPLSPLQTD 148
L+ E R + +SPN ++ PPP+ PL+ +
Sbjct: 51 LSIELTIRAVVRPISPNCESKPPPVGPLEPE 81
>03_05_0116 + 20978298-20978621,20979272-20979364
Length = 138
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 79 PDAGFSVNHGHLHQAELFCRHSC 11
PD V+HGH H + CRH C
Sbjct: 15 PDVIIIVHHGHQHSLDP-CRHHC 36
>02_05_1257 +
35286153-35286599,35286679-35287229,35287608-35287872,
35288267-35288359,35288469-35288555,35288658-35288750
Length = 511
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 171 VAEWSSSLARAGTSGAWCRSPWPG 242
V+ W ++LA+ WCR W G
Sbjct: 282 VSSWLTALAQVAYVVGWCRDGWTG 305
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/71 (23%), Positives = 25/71 (35%)
Frame = +3
Query: 57 LTLKPASGLTANSSSDLHRSTLTAPDIEMEHRSVTATVVAEWSSSLARAGTSGAWCRSPW 236
L L P A S T + R +++ +A W+SS + G C
Sbjct: 15 LILTPIVAAVAGGGSSSSSDEATLLAFKAAFRGSSSSALASWNSSTSFCSWEGVTCDRRT 74
Query: 237 PGRTNADVTPA 269
P R A P+
Sbjct: 75 PARVAALTLPS 85
>12_02_0560 - 20486368-20487159
Length = 263
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 210 RYQLSPNLKTIPPPLSPLQTDVP 142
RYQL+P ++ + ++P Q D P
Sbjct: 199 RYQLAPKVRVVEKEVAPAQADPP 221
>12_02_0215 - 15794278-15795069
Length = 263
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 210 RYQLSPNLKTIPPPLSPLQTDVP 142
RYQL+P ++ + ++P Q D P
Sbjct: 199 RYQLAPKVRVVEKEVAPAQADPP 221
>08_01_0931 +
9177466-9177493,9178205-9178317,9178418-9178759,
9178935-9179139,9179322-9179344
Length = 236
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 39 WWRCPWLTLKPASGLTANSSSDLHRSTLTAP 131
W RC W + A+ L +D R+T AP
Sbjct: 61 WLRCRWRQGRAAASLDLTVRADWRRTTAVAP 91
>07_01_0646 +
4853546-4853623,4853732-4855357,4855467-4855751,
4856131-4856277
Length = 711
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 21 RQKSSAWWRCPWLTLKPASGLTANSSSDLHRSTLTAPDIEMEHRSVTATVV 173
++ +S W+ + KPA+ L + +H L+ P++E + A +V
Sbjct: 48 KEAASGAWKIDYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIV 98
>06_02_0115 - 12016114-12016905
Length = 263
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 210 RYQLSPNLKTIPPPLSPLQTDVP 142
RYQL+P ++ + ++P Q D P
Sbjct: 199 RYQLAPKVRVVEKEVAPAQADPP 221
>05_03_0298 - 11944750-11945541
Length = 263
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 210 RYQLSPNLKTIPPPLSPLQTDVP 142
RYQL+P ++ + ++P Q D P
Sbjct: 199 RYQLAPKVRVVEKEVAPAQADPP 221
>02_03_0397 + 18574277-18574618,18574740-18574848,18574854-18575872
Length = 489
Score = 26.6 bits (56), Expect = 9.6
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -1
Query: 229 ERHQAPEVP-ALAKLEDHSATTVAVTDRCSISISGAVSVLRCKSDEEFAVRPDAGFSVNH 53
+ H P VP L L+ SA++++ S S S A S + +DE+ PD V+
Sbjct: 219 DEHLMPLVPQLLIDLQASSASSLSTYPSAS-SASIADSAVSISTDEQALTSPDKSIVVHK 277
Query: 52 GHLHQAELF 26
+H A+L+
Sbjct: 278 DSVH-ADLY 285
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,025,229
Number of Sequences: 37544
Number of extensions: 279100
Number of successful extensions: 1104
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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