Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1421
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069232-1|AAL39377.1|  523|Drosophila melanogaster GH27892p pro...    31   1.5  
AE014134-1536|AAF52692.2|  523|Drosophila melanogaster CG13091-P...    31   1.5  

>AY069232-1|AAL39377.1|  523|Drosophila melanogaster GH27892p
           protein.
          Length = 523

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 244 QSLKSLSTRVSSQT*SYAPPPCFRFLNAESRDHLFFIALICG--RDHSQPGVK*YWIPYT 71
           Q  K+  +R SSQ  +  PPP +     +S    F  A+  G   +H+ P  K  W P+ 
Sbjct: 293 QVAKNSESRSSSQLAAKKPPPIYTLATTKSNSITFGKAVKLGIHHNHTIPVTKTIWYPFA 352

Query: 70  STT*MP 53
             T  P
Sbjct: 353 HFTTCP 358


>AE014134-1536|AAF52692.2|  523|Drosophila melanogaster CG13091-PA
           protein.
          Length = 523

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 244 QSLKSLSTRVSSQT*SYAPPPCFRFLNAESRDHLFFIALICG--RDHSQPGVK*YWIPYT 71
           Q  K+  +R SSQ  +  PPP +     +S    F  A+  G   +H+ P  K  W P+ 
Sbjct: 293 QVAKNSESRSSSQLAAKKPPPIYTLATTKSNSITFGKAVKLGIHHNHTIPVTKTIWYPFA 352

Query: 70  STT*MP 53
             T  P
Sbjct: 353 HFTTCP 358


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,136,784
Number of Sequences: 53049
Number of extensions: 528630
Number of successful extensions: 1198
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)