Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1416
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   1.1  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   2.5  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   2.5  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.5  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   2.5  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   2.5  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   3.3  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         25   3.3  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         25   3.3  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         25   3.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   5.8  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   5.8  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -3

Query: 648  NGVAVFYAQYYQIVLPYSAHNITELINDVEFHSQVGSCYIKYVTKYFVELKIFSQV-D*H 472
            +G+ +    + ++V  ++   + + +ND+       SC   YVT++   LK +  V D H
Sbjct: 888  HGLKILRLDHNRLV-EFNVWLLPKQLNDIRLAFNAWSCECDYVTRFQEYLKTYDFVRDRH 946

Query: 471  RARAVKLV 448
            + R    V
Sbjct: 947  KIRCASYV 954


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 17  VWTTENSESLKV*ASS*RPQ*TVRTFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           VWT   + S     ++   Q    T T + ++  PT T ++  + T    S +PP  PT
Sbjct: 157 VWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPT 215


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 17  VWTTENSESLKV*ASS*RPQ*TVRTFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           VWT   + S     ++   Q    T T + ++  PT T ++  + T    S +PP  PT
Sbjct: 157 VWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPT 215


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 89  TFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           T T ++    P +T ++      P  +T PPC PT
Sbjct: 113 TITRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPT 147


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 465 GRGVSLLVKKSLVPRNI*LHILCSTNRP 548
           G G +L V +S+  RN+  H+ C+  RP
Sbjct: 170 GYGTALGVIRSVNERNLLEHVYCTETRP 197


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +2

Query: 17  VWTTENSESLKV*ASS*RPQ*TVRTFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           VWT   + S     ++   Q    T T + ++  PT T ++    T    S +PP  PT
Sbjct: 158 VWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPT 216


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 17  VWTTENSESLKV*ASS*RPQ*TVRTFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           +WT   + S     ++   Q    T T + ++  PT T ++    T    S +PP  PT
Sbjct: 158 IWTDPTTWSAPTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPT 216


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 89  TFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           T T ++    P +T ++      P  +T PPC PT
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPT 147


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 89  TFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           T T ++    P +T ++      P  +T PPC PT
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPT 147


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 89  TFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           T T ++    P +T ++      P  +T PPC PT
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPT 147


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 17  VWTTENSESLKV*ASS*RPQ*TVRTFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           +WT   + S     ++   Q    T T + ++  PT T ++    T    S +PP  PT
Sbjct: 158 IWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPT 216


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 17  VWTTENSESLKV*ASS*RPQ*TVRTFTGSRIYRTPTTTCSSR*AGTPPIGSTVPPCQPT 193
           +WT   + S     ++   Q    T T + ++  PT T ++    T    S +PP  PT
Sbjct: 158 IWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPT 216


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 746 CGLTSPTTSNPGYRDIRKTLHITD--SSEVENSNK 648
           CG  SPT   P  R++ KT+  +   +  V N +K
Sbjct: 453 CGDLSPTFEKPLLREMEKTIEASRFVAQHVRNKDK 487


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,389
Number of Sequences: 2352
Number of extensions: 17996
Number of successful extensions: 61
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)