Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1413
         (476 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036378-1|AAH36378.1|  633|Homo sapiens ABCC12 protein protein.       31   2.7  
AY196326-1|AAO40749.1|  930|Homo sapiens truncated ABCC12 protei...    31   2.7  
AY040220-1|AAK76740.1| 1359|Homo sapiens ATP-binding cassette tr...    31   2.7  
AF411578-1|AAL99901.1| 1009|Homo sapiens ATP-binding cassette pr...    31   2.7  
AF411577-1|AAL99900.1| 1009|Homo sapiens ATP-binding cassette pr...    31   2.7  
AF395909-1|AAL79529.1|  935|Homo sapiens ATP-binding cassette pr...    31   2.7  
AF395908-1|AAL79528.1| 1009|Homo sapiens ATP-binding cassette pr...    31   2.7  

>BC036378-1|AAH36378.1|  633|Homo sapiens ABCC12 protein protein.
          Length = 633

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


>AY196326-1|AAO40749.1|  930|Homo sapiens truncated ABCC12 protein
           protein.
          Length = 930

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


>AY040220-1|AAK76740.1| 1359|Homo sapiens ATP-binding cassette
           transporter sub-family C member 12 protein.
          Length = 1359

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


>AF411578-1|AAL99901.1| 1009|Homo sapiens ATP-binding cassette
           protein C12 isoform D protein.
          Length = 1009

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


>AF411577-1|AAL99900.1| 1009|Homo sapiens ATP-binding cassette
           protein C12 isoform C-p1 protein.
          Length = 1009

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


>AF395909-1|AAL79529.1|  935|Homo sapiens ATP-binding cassette
           protein C12 isoform B protein.
          Length = 935

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


>AF395908-1|AAL79528.1| 1009|Homo sapiens ATP-binding cassette
           protein C12 isoform A protein.
          Length = 1009

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 143 LCVVLGLTE*TAVFFWSIGPCTIVAVAVRVSFAL 42
           LC+ L  TE T VFFW++        A+R+  AL
Sbjct: 165 LCIALFATEFTKVFFWALAWAINYRTAIRLKVAL 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,790,911
Number of Sequences: 237096
Number of extensions: 993085
Number of successful extensions: 1442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)