Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1412
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   0.92 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   2.8  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.7  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   6.5  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.6  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.8 bits (54), Expect = 0.92
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 243 SYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 347
           S++AI T LQ   +K VP G    V  YFE  E+V
Sbjct: 646 SWQAIATALQ---MKGVPAGLQRIVRSYFENRELV 677


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 425  IENKSPVIFSCEVAHHI*YALWVQLIDYLDSFKINQH 315
            +E+ + V+F CEV H I     V+L+ Y  S  +N++
Sbjct: 957  VESVAHVLFQCEVFHEI----RVELLGYGTSDPVNEN 989


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 138  LHKVEEGHVGVYYR 179
            LH++E+G VG+Y R
Sbjct: 1052 LHQLEDGEVGIYRR 1065


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 176 SGWSFITSYKSSWFSHDDTTSNIIQSHSDNFTN 274
           +G + I    SSW    D+T   +QS +DN T+
Sbjct: 722 TGMAGINGLSSSWHKVLDSTQLRLQSTTDNATD 754


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 503  DLIKQINVYLVQGMGTTELIQFMVHFIE 420
            DL + + VYL +G G+  L+   ++ +E
Sbjct: 3297 DLAEDVEVYLNKGQGSMNLLDERINALE 3324


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 170 LLSGWSFITSYKSSWFS 220
           LL GWS +T+ K  W S
Sbjct: 10  LLLGWSTVTAQKDWWES 26


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -2

Query: 282 LHQFVKLSEWLCMMLEVVSSCENQLDL*LVIKLHPDNKHQHVL 154
           +H F + +  L + L V+ + +++  L   +KL     H H L
Sbjct: 248 VHAFCEAAPMLLLQLYVLVTLQSEAQLAAALKLKTLGHHHHHL 290


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 240 TSYKAIQTTLQTDEVKNVPCGTSGGVLIYFER 335
           + ++AI+  L+T  V+N+    +G  + YF +
Sbjct: 198 SDHRAIRIDLETQSVRNLSRPITGWSIKYFSK 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,886
Number of Sequences: 2352
Number of extensions: 10980
Number of successful extensions: 51
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)