Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1402
         (721 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    38   0.25 
UniRef50_P24357 Cluster: Kelch repeat protein F3; n=35; Orthopox...    36   1.3  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.8  
UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep: Trans...    34   3.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 622 WVDELTAYLALSGYWKP 572
           WVDELTA+L LSGYW P
Sbjct: 159 WVDELTAHLVLSGYWSP 175


>UniRef50_P24357 Cluster: Kelch repeat protein F3; n=35;
           Orthopoxvirus|Rep: Kelch repeat protein F3 - Vaccinia
           virus (strain Western Reserve / WR) (VACV)
          Length = 480

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -3

Query: 602 LSGVKWLLEAINVYNVNTPPTLRYKF*GLKYSYNSCPTLQTVTHYCFTAEIGSVV 438
           ++ VKW+L+   +++ +  P   YK+  ++Y  N    +  + H C +  +G VV
Sbjct: 221 INNVKWILDCTKIFHCDKQPRKSYKYPFIEYPMNMDQIID-IFHMCTSTHVGEVV 274


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 439 WWYLSVLTHKRSYHQ*QTS 383
           WWYL   THKRSYH+ Q S
Sbjct: 571 WWYLPARTHKRSYHRYQCS 589


>UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep:
          Transposase - Bombyx mori (Silk moth)
          Length = 346

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 46 MEWTLKEDRVAVIAL 2
          MEWTLKEDRVAVIAL
Sbjct: 1  MEWTLKEDRVAVIAL 15


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,785,761
Number of Sequences: 1657284
Number of extensions: 13668335
Number of successful extensions: 24793
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24790
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)