Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1402
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical
           protein T14G10.6 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 91  MNNSKFEFNNFFCGQHSKRK 150
           +N+SK EF N+FCG   + K
Sbjct: 212 INSSKLEFKNYFCGHGVRLK 231


>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical protein
            ZK675.1 protein.
          Length = 1405

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +2

Query: 215  YVNYNLCWFDFNYMMFFIQRGSYSRM*AKYVFDYNY 322
            + NY   WF+ ++MM+++ + S+     K+    N+
Sbjct: 1075 FYNYLTAWFNVDHMMYYVSQASFFPTPPKWELSKNH 1110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,496,119
Number of Sequences: 27780
Number of extensions: 335754
Number of successful extensions: 670
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)