Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1401
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SU53 Cluster: Chromosome 2 SCAF14024, whole genome sh...   136   6e-31
UniRef50_Q4STI8 Cluster: Chromosome undetermined SCAF14198, whol...   136   6e-31
UniRef50_P53396 Cluster: ATP-citrate synthase (EC 2.3.3.8) (ATP-...   136   6e-31
UniRef50_A7LNF0 Cluster: ATP citrate lyase; n=1; Toxoplasma gond...   118   2e-25
UniRef50_Q9C522 Cluster: ATP citrate lyase, putative; 3734-7120;...   103   4e-21
UniRef50_Q9XFY7 Cluster: Putative ATP-dependent citrate lyase; n...    76   8e-13
UniRef50_Q8KDG2 Cluster: Citrate lyase, subunit2; n=11; Chlorobi...    58   3e-07
UniRef50_Q8ECH6 Cluster: Putative uncharacterized protein; n=6; ...    34   3.3  
UniRef50_Q54L58 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_Q0EZ08 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_Q4Q834 Cluster: Putative uncharacterized protein; n=3; ...    33   5.8  
UniRef50_O45621 Cluster: Putative uncharacterized protein; n=3; ...    33   5.8  

>UniRef50_Q4SU53 Cluster: Chromosome 2 SCAF14024, whole genome shotgun
            sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
            SCAF14024, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 962

 Score =  136 bits (329), Expect = 6e-31
 Identities = 57/89 (64%), Positives = 73/89 (82%)
 Frame = +2

Query: 2    LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
            LDVE ITT KKPNLILNVDG +  A VDL R C  FT+DE + ++++G++N +FVLGR++
Sbjct: 869  LDVEKITTSKKPNLILNVDGFIGVAFVDLLRTCGGFTRDEADEFVEIGALNGIFVLGRSM 928

Query: 182  GLVGHYLDQKRMKQPLYRHPWDDITYMSP 268
            G +GHYLDQKR+KQ LYRHPWDDI+Y+ P
Sbjct: 929  GFIGHYLDQKRLKQGLYRHPWDDISYVLP 957


>UniRef50_Q4STI8 Cluster: Chromosome undetermined SCAF14198, whole
           genome shotgun sequence; n=2; Euteleostomi|Rep:
           Chromosome undetermined SCAF14198, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 535

 Score =  136 bits (329), Expect = 6e-31
 Identities = 57/89 (64%), Positives = 73/89 (82%)
 Frame = +2

Query: 2   LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
           LDVE ITT KKPNLILNVDG +  A VDL R C  FT+DE + ++++G++N +FVLGR++
Sbjct: 442 LDVEKITTSKKPNLILNVDGFIGVAFVDLLRTCGGFTRDEADEFVEIGALNGIFVLGRSM 501

Query: 182 GLVGHYLDQKRMKQPLYRHPWDDITYMSP 268
           G +GHYLDQKR+KQ LYRHPWDDI+Y+ P
Sbjct: 502 GFIGHYLDQKRLKQGLYRHPWDDISYVLP 530


>UniRef50_P53396 Cluster: ATP-citrate synthase (EC 2.3.3.8)
            (ATP-citrate (pro-S-)-lyase); n=149; root|Rep:
            ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate
            (pro-S-)-lyase) - Homo sapiens (Human)
          Length = 1101

 Score =  136 bits (329), Expect = 6e-31
 Identities = 56/89 (62%), Positives = 74/89 (83%)
 Frame = +2

Query: 2    LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
            L+VE ITT KKPNLILNVDG++  A VD+ R+C  FT++E + YI +G++N +FVLGR++
Sbjct: 1008 LEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSM 1067

Query: 182  GLVGHYLDQKRMKQPLYRHPWDDITYMSP 268
            G +GHYLDQKR+KQ LYRHPWDDI+Y+ P
Sbjct: 1068 GFIGHYLDQKRLKQGLYRHPWDDISYVLP 1096


>UniRef50_A7LNF0 Cluster: ATP citrate lyase; n=1; Toxoplasma
            gondii|Rep: ATP citrate lyase - Toxoplasma gondii
          Length = 1281

 Score =  118 bits (283), Expect = 2e-25
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = +2

Query: 8    VEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTIGL 187
            VE +TT+KK  LILNVDG++  +M DL  HC  FT++E  +YI  G IN LFVLGR+IG 
Sbjct: 1185 VEQVTTKKKDTLILNVDGLIGVSMCDLLFHCGHFTENEARDYINNGCINGLFVLGRSIGF 1244

Query: 188  VGHYLDQKRMKQPLYRHPWDDITYMSP 268
            +GH+LDQKR+KQ LYRH  DDI Y+ P
Sbjct: 1245 IGHFLDQKRLKQGLYRHDVDDIAYVLP 1271


>UniRef50_Q9C522 Cluster: ATP citrate lyase, putative; 3734-7120;
           n=43; cellular organisms|Rep: ATP citrate lyase,
           putative; 3734-7120 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 608

 Score =  103 bits (248), Expect = 4e-21
 Identities = 44/86 (51%), Positives = 60/86 (69%)
 Frame = +2

Query: 2   LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
           + VE  T  K  NL+LNVDG + +  +DL     +FT+ E +  +Q+G +N LFVL R+I
Sbjct: 521 VQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNGLFVLARSI 580

Query: 182 GLVGHYLDQKRMKQPLYRHPWDDITY 259
           GL+GH  DQKR+KQPLYRHPW+D+ Y
Sbjct: 581 GLIGHTFDQKRLKQPLYRHPWEDVLY 606


>UniRef50_Q9XFY7 Cluster: Putative ATP-dependent citrate lyase; n=1;
           Auxenochlorella protothecoides|Rep: Putative
           ATP-dependent citrate lyase - Chlorella protothecoides
           (Green microalga) (Auxenochlorellaprotothecoides)
          Length = 242

 Score = 76.2 bits (179), Expect = 8e-13
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = +2

Query: 110 TQDEGNNYIQMGSINALFVLGRTIGLVGHYLDQKRMKQPLYRHPWDDITY 259
           T+ E ++ +++G +N LFVL RTIGL+GH LDQKR+ QPLYRHPWDD+ Y
Sbjct: 191 TKVEIDSIVKIGYLNGLFVLARTIGLIGHCLDQKRLGQPLYRHPWDDVLY 240



 Score = 33.9 bits (74), Expect = 4.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   LDVEAITTRKKPNLILNVDGIVAAAMVDL 88
           ++VE  T +K  NL+LNVDG + A  +DL
Sbjct: 121 VEVEGYTLQKAANLVLNVDGCIGALFLDL 149


>UniRef50_Q8KDG2 Cluster: Citrate lyase, subunit2; n=11;
           Chlorobiaceae|Rep: Citrate lyase, subunit2 - Chlorobium
           tepidum
          Length = 610

 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 34/78 (43%), Positives = 44/78 (56%)
 Frame = +2

Query: 2   LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
           L+VE ITT KK NLILNVDG +   ++DL      F +          S+N  FVL RTI
Sbjct: 527 LEVEKITTAKKENLILNVDGTIGCILMDLG-----FPEH---------SLNGFFVLARTI 572

Query: 182 GLVGHYLDQKRMKQPLYR 235
           G++GH++DQ      L R
Sbjct: 573 GMIGHWIDQNNQNSRLIR 590


>UniRef50_Q8ECH6 Cluster: Putative uncharacterized protein; n=6;
           Bacteria|Rep: Putative uncharacterized protein -
           Shewanella oneidensis
          Length = 133

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 438 KNKLVLQHINKNLHSIAGLKSDAVTSQLYL*VDVLVQIIQHY 313
           +N L+ Q ++ NL  + GL++ AV     L +D++V ++QH+
Sbjct: 78  QNNLITQPLSDNLKKMVGLRNIAVHDYQELNLDIVVHVVQHH 119


>UniRef50_Q54L58 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 587

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -2

Query: 326 SFNIISTFETQNTTGSLSSEATCR*CRPT--DDGTEAASSSSGPSNVRPDLSCDPGRT 159
           SF I +TF   +TTGS +  +T      T     T AASS++GPS      +  P  T
Sbjct: 264 SFGIYTTFPKASTTGSTTGPSTTHAASSTTGPSTTHAASSTTGPSTTHAASTTGPSTT 321


>UniRef50_Q0EZ08 Cluster: Putative uncharacterized protein; n=1;
           Mariprofundus ferrooxydans PV-1|Rep: Putative
           uncharacterized protein - Mariprofundus ferrooxydans
           PV-1
          Length = 1592

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -2

Query: 296 QNTTGSLSSEATCR*CRPTDDGTEAASSSSGPSNVRPDLSCDP 168
           QN TGS S  A       T   T+ AS+S+ P NV P  + DP
Sbjct: 266 QNQTGSSSQTAAASPSHDTAAATDTASASTKPENVTPAPASDP 308


>UniRef50_Q4Q834 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 621

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 362 HNCTYRSMFSCKSFNIIS-TFETQNTTGSLSSEATCR*CRPTDDGTEAASSSSGPS 198
           HNC +    S  S +  + T +T  TTGS SS  +C  C P         S+  PS
Sbjct: 391 HNCQHSPGLSSSSTSSCTRTPDTHTTTGSSSSLCSCSACAPAPASATVKESTPSPS 446


>UniRef50_O45621 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 607

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 394 HCGLEV*RCDVTIVLIGRCSRANHSTLFLRLKHKIQPGHLVQRRHVGDVVPRM 236
           H GL+        +LIG C  ANH+ +F   + K+Q   +VQ    G+  PR+
Sbjct: 434 HTGLDKRNGKFKFLLIGNCWAANHARIFYD-ECKVQAKRIVQFSEAGEAQPRI 485


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,219,664
Number of Sequences: 1657284
Number of extensions: 15013322
Number of successful extensions: 39605
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 37973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39590
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)