Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1401
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr...   132   3e-31
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...   126   2e-29
Z98851-4|CAB11542.1|  607|Caenorhabditis elegans Hypothetical pr...    33   0.17 
Z99281-35|CAB16518.2|  524|Caenorhabditis elegans Hypothetical p...    29   4.8  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z98851-5|CAB11541.1|  596|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical protein
            D1005.1 protein.
          Length = 1106

 Score =  132 bits (319), Expect = 3e-31
 Identities = 57/89 (64%), Positives = 70/89 (78%)
 Frame = +2

Query: 2    LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
            L+VE ITT KKPNLILNVDG +A   VD+ RH  +FT+ E    I++GS+N LFVLGR+I
Sbjct: 1011 LEVEKITTAKKPNLILNVDGAIAILFVDILRHSGMFTKQEAEETIEIGSLNGLFVLGRSI 1070

Query: 182  GLVGHYLDQKRMKQPLYRHPWDDITYMSP 268
            G +GHYLDQ R+KQ LYRHPWDDI+Y+ P
Sbjct: 1071 GFIGHYLDQSRLKQGLYRHPWDDISYIMP 1099


>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical protein
            B0365.1 protein.
          Length = 1099

 Score =  126 bits (304), Expect = 2e-29
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = +2

Query: 2    LDVEAITTRKKPNLILNVDGIVAAAMVDLFRHCQLFTQDEGNNYIQMGSINALFVLGRTI 181
            L+VE ITT KKPNLILNVDG +A   VD+ R+  +FT  E    I++G++N +FVLGR+I
Sbjct: 1007 LEVEKITTAKKPNLILNVDGAIAIIFVDILRNSGMFTTAEAQEVIEIGALNGMFVLGRSI 1066

Query: 182  GLVGHYLDQKRMKQPLYRHPWDDITYMSP 268
            G +GHYLDQ R+KQ LYRHPWDDI+Y+ P
Sbjct: 1067 GFIGHYLDQSRLKQGLYRHPWDDISYIMP 1095


>Z98851-4|CAB11542.1|  607|Caenorhabditis elegans Hypothetical
           protein H12I19.5a protein.
          Length = 607

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 394 HCGLEV*RCDVTIVLIGRCSRANHSTLFLRLKHKIQPGHLVQRRHVGDVVPRM 236
           H GL+        +LIG C  ANH+ +F   + K+Q   +VQ    G+  PR+
Sbjct: 434 HTGLDKRNGKFKFLLIGNCWAANHARIFYD-ECKVQAKRIVQFSEAGEAQPRI 485


>Z99281-35|CAB16518.2|  524|Caenorhabditis elegans Hypothetical
           protein Y57G11C.17 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 666 FLRH*RPGPNRFEQISLPTRIYFNILVFSMEFRLLFLDII 547
           FL   +PG + F +I   + IYF+ L +SM   + F D I
Sbjct: 194 FLCDLKPGKSDFSKIMADSLIYFSYLPYSMTLIVRFEDFI 233


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
           protein H02F09.3 protein.
          Length = 1275

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -2

Query: 326 SFNIISTFETQNTTGSLSSEATCR*CRPTDDGTEAASSSSGPSNVRPDLSCD 171
           S + +ST+   ++T   +S AT +  +PT  GT   S SSGP+ V P  S +
Sbjct: 463 SMSSLSTYTPSSSTAGATSPATQQSTKPT-IGT---SMSSGPTTVAPGASTE 510


>Z98851-5|CAB11541.1|  596|Caenorhabditis elegans Hypothetical
           protein H12I19.5b protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 394 HCGLEV*RCDVTIVLIGRCSRANHSTLFLRLKHKIQPGHLVQRRHVG 254
           H GL+        +LIG C  ANH+ +F   + K+Q   +VQ    G
Sbjct: 434 HTGLDKRNGKFKFLLIGNCWAANHARIFYD-ECKVQAKRIVQFSEAG 479


>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
           protein ZK593.5 protein.
          Length = 1326

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -2

Query: 530 ISKIDSNHGATTILLLSFITRTYNAVSTEAERIN*Y 423
           + K++S  G TT+ +L  +T TY  +ST  + ++ Y
Sbjct: 751 LGKLESAIGETTVEVLIKLTETYGEMSTHEKTVDQY 786


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,970,807
Number of Sequences: 27780
Number of extensions: 365630
Number of successful extensions: 1045
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)