Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1400
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 34 0.32
BC051323-1|AAH51323.1| 340|Homo sapiens zinc finger protein 488... 33 0.75
BC026895-1|AAH26895.1| 233|Homo sapiens ZNF488 protein protein. 33 0.75
AL731561-7|CAH74044.1| 340|Homo sapiens zinc finger protein 488... 33 0.75
AK056666-1|BAB71246.1| 340|Homo sapiens protein ( Homo sapiens ... 33 0.75
Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein. 31 1.7
X98296-1|CAA66942.1| 2547|Homo sapiens ubiquitin hydrolase protein. 31 1.7
BC063645-1|AAH63645.1| 918|Homo sapiens USP9X protein protein. 31 1.7
BC046205-1|AAH46205.1| 473|Homo sapiens USP9X protein protein. 31 1.7
AL391259-2|CAD13527.2| 2547|Homo sapiens ubiquitin specific pept... 31 1.7
AL109797-1|CAD18900.2| 2547|Homo sapiens ubiquitin specific pept... 31 1.7
AB209666-1|BAD92903.1| 867|Homo sapiens USP9X protein variant p... 31 1.7
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 31 2.3
BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein. 31 2.3
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 31 2.3
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 31 2.3
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 31 2.3
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 31 2.3
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 31 2.3
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 31 2.3
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 31 2.3
Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1... 31 3.0
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1... 31 3.0
Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for ... 31 3.0
X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein. 31 3.0
X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein. 31 3.0
M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein. 31 3.0
BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512... 31 3.0
BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512... 31 3.0
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 3.0
BC043352-1|AAH43352.1| 1013|Homo sapiens zinc finger and BTB dom... 31 3.0
AY302699-1|AAP59447.1| 1013|Homo sapiens KAISO-like zinc finger ... 31 3.0
AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein. 31 3.0
AK001021-1|BAA91470.1| 268|Homo sapiens protein ( Homo sapiens ... 31 3.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 3.0
AB040971-1|BAA96062.2| 1029|Homo sapiens KIAA1538 protein protein. 31 3.0
AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein. 31 3.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 3.0
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 3.0
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 3.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 3.0
U52165-1|AAC50622.1| 461|Homo sapiens tumor necrosis factor rec... 30 5.3
S63368-1|AAB19824.2| 425|Homo sapiens tumor necrosis factor rec... 30 5.3
M55994-1|AAA36755.1| 461|Homo sapiens tumor necrosis factor rec... 30 5.3
M32315-1|AAA59929.1| 461|Homo sapiens tumor necrosis factor rec... 30 5.3
CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein. 30 5.3
BT019927-1|AAV38730.1| 461|Homo sapiens tumor necrosis factor r... 30 5.3
BC052977-1|AAH52977.1| 461|Homo sapiens tumor necrosis factor r... 30 5.3
BC047782-1|AAH47782.1| 122|Homo sapiens Unknown (protein for MG... 30 5.3
BC042167-1|AAH42167.1| 457|Homo sapiens Similar to tumor necros... 30 5.3
BC011844-1|AAH11844.1| 457|Homo sapiens TNFRSF1B protein protein. 30 5.3
AY342040-1|AAP88939.1| 461|Homo sapiens tumor necrosis factor r... 30 5.3
AY264804-1|AAO89076.1| 461|Homo sapiens tumor necrosis factor r... 30 5.3
AL357835-3|CAH73721.1| 461|Homo sapiens tumor necrosis factor r... 30 5.3
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 30 5.3
AL031276-4|CAI19225.1| 461|Homo sapiens tumor necrosis factor r... 30 5.3
M35857-1|AAA63262.1| 346|Homo sapiens TNFR1 protein. 29 7.0
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 29 7.0
Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2 p... 29 9.2
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein. 29 9.2
BC027951-1|AAH27951.1| 672|Homo sapiens C20orf32 protein protein. 29 9.2
BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein. 29 9.2
AL121986-4|CAI10851.1| 280|Homo sapiens CD1c molecule protein. 29 9.2
AL121914-13|CAC12719.2| 786|Homo sapiens chromosome 20 open rea... 29 9.2
AJ276678-1|CAC00655.1| 785|Homo sapiens HEF like Protein protein. 29 9.2
AF193046-1|AAG22474.1| 277|Homo sapiens unknown protein. 29 9.2
AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced p... 29 9.2
AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase k... 29 9.2
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator suppressor-of-white-apricot
mRNA, complete cds. ).
Length = 951
Score = 33.9 bits (74), Expect = 0.32
Identities = 30/106 (28%), Positives = 46/106 (43%)
Frame = +3
Query: 96 RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIRWLCRSRST*RCPYLNPTRSTLQWSNLSM 275
R +R P HS+++SR+ + R + RSRS R P + S+
Sbjct: 766 RTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSV 825
Query: 276 YLFIRLSTKLLKNQYRTRSKNQCPMKSKSLMPLRSKKK*RCPSLSP 413
R+S ++ RTRS++ K K R+K K R S+SP
Sbjct: 826 PTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSP 871
>BC051323-1|AAH51323.1| 340|Homo sapiens zinc finger protein 488
protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.75
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 203 PTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRALASATKR 60
PT P G +L + PR G A VWPSG+ S + A + TKR
Sbjct: 125 PTGQP-GAPQLTQNIPR--GPAGSKVFSVWPSGARSEQRSAFSKPTKR 169
>BC026895-1|AAH26895.1| 233|Homo sapiens ZNF488 protein protein.
Length = 233
Score = 32.7 bits (71), Expect = 0.75
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 203 PTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRALASATKR 60
PT P G +L + PR G A VWPSG+ S + A + TKR
Sbjct: 18 PTGQP-GAPQLTQNIPR--GPAGSKVFSVWPSGARSEQRSAFSKPTKR 62
>AL731561-7|CAH74044.1| 340|Homo sapiens zinc finger protein 488
protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.75
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 203 PTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRALASATKR 60
PT P G +L + PR G A VWPSG+ S + A + TKR
Sbjct: 125 PTGQP-GAPQLTQNIPR--GPAGSKVFSVWPSGARSEQRSAFSKPTKR 169
>AK056666-1|BAB71246.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ32104 fis, clone OCBBF2001307. ).
Length = 340
Score = 32.7 bits (71), Expect = 0.75
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 203 PTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRALASATKR 60
PT P G +L + PR G A VWPSG+ S + A + TKR
Sbjct: 125 PTGQP-GAPQLTQNIPR--GPAGSKVFSVWPSGARSEQRSAFSKPTKR 169
>Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein.
Length = 2555
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 2085 VRFWFTHNVLFNVSNRFSEYLLEC 2108
>X98296-1|CAA66942.1| 2547|Homo sapiens ubiquitin hydrolase protein.
Length = 2547
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 2077 VRFWFAHNVLFNVSNRFSEYLLEC 2100
>BC063645-1|AAH63645.1| 918|Homo sapiens USP9X protein protein.
Length = 918
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 448 VRFWFAHNVLFNVSNRFSEYLLEC 471
>BC046205-1|AAH46205.1| 473|Homo sapiens USP9X protein protein.
Length = 473
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 3 VRFWFAHNVLFNVSNRFSEYLLEC 26
>AL391259-2|CAD13527.2| 2547|Homo sapiens ubiquitin specific peptidase
9, X-linked protein.
Length = 2547
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 2077 VRFWFAHNVLFNVSNRFSEYLLEC 2100
>AL109797-1|CAD18900.2| 2547|Homo sapiens ubiquitin specific peptidase
9, X-linked protein.
Length = 2547
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 2077 VRFWFAHNVLFNVSNRFSEYLLEC 2100
>AB209666-1|BAD92903.1| 867|Homo sapiens USP9X protein variant
protein.
Length = 867
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 325 VRYWFFNNLVDNLINRYMDRLLHC 254
VR+WF +N++ N+ NR+ + LL C
Sbjct: 397 VRFWFAHNVLFNVSNRFSEYLLEC 420
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 237 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 264
>BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein.
Length = 1365
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 838 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 865
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1341 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1368
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1381 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1408
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1381 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1408
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1381 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1408
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1381 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1408
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1062 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1089
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIP 232
VTV++ V +P P V+ P YV +P+P
Sbjct: 1387 VTVLEPSVVTVPEPPVVAEPDYVTIPVP 1414
>Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 134 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
TKP T+ +G+P+P P S+ ++K P P P+ + P
Sbjct: 544 TKPVLPTLTTSVGLPLP-PSLPSLIPFIKTEEPAPIPISHSATSP 587
>Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 134 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
TKP T+ +G+P+P P S+ ++K P P P+ + P
Sbjct: 544 TKPVLPTLTTSVGLPLP-PSLPSLIPFIKTEEPAPIPISHSATSP 587
>Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for
acrosin (EC 3.4.21.10). ).
Length = 421
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 95 KNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
K GS Q T P T I P HP++ +P Y + P P+P P QP
Sbjct: 288 KIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPP-PRPLPPRPPAAQP 344
>X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein.
Length = 421
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 95 KNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
K GS Q T P T I P HP++ +P Y + P P+P P QP
Sbjct: 288 KIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPP-PRPLPPRPPAAQP 344
>X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein.
Length = 421
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 95 KNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
K GS Q T P T I P HP++ +P Y + P P+P P QP
Sbjct: 288 KIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPP-PRPLPPRPPAAQP 344
>M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein.
Length = 184
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 95 KNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
K GS Q T P T I P HP++ +P Y + P P+P P QP
Sbjct: 51 KIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPP-PRPLPPRPPAAQP 107
>BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 134 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
TKP VT + P+P ++V + V V P P VTV +PI
Sbjct: 255 TKPITVTKSVPVTKPVPVTKPITVTKLVTVTKPVPVTKPVTVSRPI 300
>BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 134 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
TKP VT + P+P ++V + V V P P VTV +PI
Sbjct: 255 TKPITVTKSVPVTKPVPVTKPITVTKLVTVTKPVPVTKPVTVSRPI 300
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT R+ R + P+ +R R+ R G R + RSRT P RRS R P R
Sbjct: 587 RTPARRRSR---SRTPTRRRSRSRTPA-RRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 192 WLCRSRS 212
RSRS
Sbjct: 643 RSGRSRS 649
>BC043352-1|AAH43352.1| 1013|Homo sapiens zinc finger and BTB domain
containing 4 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 130 THEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGP 249
THEA C RG R S G GP G S LP P
Sbjct: 251 THEA-QCRRGASTRGSTGLGAGGAGPGGPAGVDASALPPP 289
>AY302699-1|AAP59447.1| 1013|Homo sapiens KAISO-like zinc finger
protein 1 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 130 THEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGP 249
THEA C RG R S G GP G S LP P
Sbjct: 251 THEA-QCRRGASTRGSTGLGAGGAGPGGPAGVDASALPPP 289
>AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein.
Length = 892
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 134 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
TKP VT + P+P ++V + V V P P VTV +PI
Sbjct: 255 TKPITVTKSVPVTKPVPVTKPITVTKLVTVTKPVPVTKPVTVSRPI 300
>AK001021-1|BAA91470.1| 268|Homo sapiens protein ( Homo sapiens
cDNA FLJ10159 fis, clone HEMBA1003528. ).
Length = 268
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 77 PALGLLKNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 256
P + ++ NG + P +V + +P+PV V +P V +PIP P P HV+
Sbjct: 88 PPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPYPVIVPLP--VPIPIPIPIP-HVS 144
Query: 257 VEQP 268
+P
Sbjct: 145 DSKP 148
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT R+ R + P+ +R R+ R G R + RSRT P RRS R P R
Sbjct: 587 RTPARRRSR---SRTPTRRRSRSRTPA-RRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 192 WLCRSRS 212
RSRS
Sbjct: 643 RSGRSRS 649
>AB040971-1|BAA96062.2| 1029|Homo sapiens KIAA1538 protein protein.
Length = 1029
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 130 THEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGP 249
THEA C RG R S G GP G S LP P
Sbjct: 267 THEA-QCRRGASTRGSTGLGAGGAGPGGPAGVDASALPPP 305
>AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein.
Length = 851
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 134 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
TKP VT + P+P ++V + V V P P VTV +PI
Sbjct: 214 TKPITVTKSVPVTKPVPVTKPITVTKLVTVTKPVPVTKPVTVSRPI 259
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT R+ R + P+ +R R+ R G R + RSRT P RRS R P R
Sbjct: 587 RTPARRRSR---SRTPTRRRSRSRTPA-RRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 192 WLCRSRS 212
RSRS
Sbjct: 643 RSGRSRS 649
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT R+ R + P+ +R R+ R G R + RSRT P RRS R P R
Sbjct: 552 RTPARRRSR---SRTPTRRRSRSRTPA-RRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 607
Query: 192 WLCRSRS 212
RSRS
Sbjct: 608 RSGRSRS 614
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT R+ R + P+ +R R+ R G R + RSRT P RRS R P R
Sbjct: 377 RTPARRRSR---SRTPTRRRSRSRTPA-RRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 432
Query: 192 WLCRSRS 212
RSRS
Sbjct: 433 RSGRSRS 439
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT R+ R + P+ +R R+ R G R + RSRT P RRS R P R
Sbjct: 635 RTPARRRSR---SRTPTRRRSRSRTPA-RRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 690
Query: 192 WLCRSRS 212
RSRS
Sbjct: 691 RSGRSRS 697
>U52165-1|AAC50622.1| 461|Homo sapiens tumor necrosis factor
receptor protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>S63368-1|AAB19824.2| 425|Homo sapiens tumor necrosis factor
receptor protein.
Length = 425
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 305 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 364
Query: 77 ASAT 66
AS+T
Sbjct: 365 ASST 368
>M55994-1|AAA36755.1| 461|Homo sapiens tumor necrosis factor
receptor protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>M32315-1|AAA59929.1| 461|Homo sapiens tumor necrosis factor
receptor protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.3
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 95 KNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
K GS Q T P T I P HP++ +P Y + P P+P P QP
Sbjct: 288 KIGSNALRVIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPP-PRPLPPRPPAAQP 344
>BT019927-1|AAV38730.1| 461|Homo sapiens tumor necrosis factor
receptor superfamily, member 1B protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>BC052977-1|AAH52977.1| 461|Homo sapiens tumor necrosis factor
receptor superfamily, member 1B protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>BC047782-1|AAH47782.1| 122|Homo sapiens Unknown (protein for
MGC:54300) protein.
Length = 122
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 154 GHMVRLRVLLCACGLRAPILQKAERWRALLREGR 53
G +V+ RVL C G+ P+L++A R + L ++ R
Sbjct: 85 GSVVKARVLTCVEGMNLPLLEQAIREQRLYKQER 118
>BC042167-1|AAH42167.1| 457|Homo sapiens Similar to tumor necrosis
factor receptor superfamily, member 1B protein.
Length = 457
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 337 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 396
Query: 77 ASAT 66
AS+T
Sbjct: 397 ASST 400
>BC011844-1|AAH11844.1| 457|Homo sapiens TNFRSF1B protein protein.
Length = 457
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 337 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 396
Query: 77 ASAT 66
AS+T
Sbjct: 397 ASST 400
>AY342040-1|AAP88939.1| 461|Homo sapiens tumor necrosis factor
receptor superfamily, member 1B protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>AY264804-1|AAO89076.1| 461|Homo sapiens tumor necrosis factor
receptor superfamily, member 1B protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>AL357835-3|CAH73721.1| 461|Homo sapiens tumor necrosis factor
receptor superfamily, member 1B protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 29.9 bits (64), Expect = 5.3
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 95 KNGSPKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
K GS Q T P T I P HP++ +P Y + P P+P P QP
Sbjct: 99 KIGSNALRMIQSATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPP-PRPLPPRPPAAQP 155
>AL031276-4|CAI19225.1| 461|Homo sapiens tumor necrosis factor
receptor superfamily, member 1B protein.
Length = 461
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 251 RGPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEGRAL 78
R P R + AP A + SSP HGT VT V V S HSS+ +
Sbjct: 341 RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQ 400
Query: 77 ASAT 66
AS+T
Sbjct: 401 ASST 404
>M35857-1|AAA63262.1| 346|Homo sapiens TNFR1 protein.
Length = 346
Score = 29.5 bits (63), Expect = 7.0
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -1
Query: 251 RGPGRVEVWAP---SRTAGPTQPPDGESELRSSSPRSHGTASCVT--VCVWPSGSHSSEG 87
R P R + AP + AG + G S+ SSP HGT VT V V S HSS+
Sbjct: 226 RAPTRNQPQAPGVEASGAGEARTSTGSSD---SSPGGHGTQVNVTCIVNVCSSSDHSSQC 282
Query: 86 RALASAT 66
+ AS+T
Sbjct: 283 SSQASST 289
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 152 TVVKKIGVPIPHPVAVSVPQYVKVPIP 232
T I PIPHP+ S+P Y ++ +P
Sbjct: 370 TSTASIATPIPHPIQGSLPPYSRLGMP 396
>Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2
protein.
Length = 530
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P+ P + VP V VP+P P P+ + + P
Sbjct: 223 PLVPPATLLVPYPVIVPLPVPVPIPIPIPMP 253
>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
Length = 2911
Score = 29.1 bits (62), Expect = 9.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 242 GRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRALASATK 63
G V +WA TAG QPP + P+ +A+ + + + + EG A+AS +
Sbjct: 17 GCVVLWAQG-TAGQPQPPPPKPPRPQPPPQQVRSATAGSEGGFLAPEYREEGAAVASRVR 75
Query: 62 RR 57
RR
Sbjct: 76 RR 77
>BC027951-1|AAH27951.1| 672|Homo sapiens C20orf32 protein protein.
Length = 672
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -1
Query: 242 GRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRA 81
G W RT P+ PD S SS R+ +SC T S S SSE A
Sbjct: 378 GHNSSWFSRRTTSPSPEPDRLSG-SSSDSRASIVSSCSTTSTDDSSSSSSEESA 430
>BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein.
Length = 530
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 179 IPHPVAVSVPQYVKVPIPQPYP 244
+P+PV V +P V +PIP P P
Sbjct: 232 VPYPVIVPLPVPVPIPIPIPVP 253
>AL121986-4|CAI10851.1| 280|Homo sapiens CD1c molecule protein.
Length = 280
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 227 WAPSRTAGPTQPPDGESELRSSSPRS 150
WA RT+ T PPD LR+ PRS
Sbjct: 230 WAHIRTSCETLPPDSPIVLRTQQPRS 255
>AL121914-13|CAC12719.2| 786|Homo sapiens chromosome 20 open
reading frame 32 protein.
Length = 786
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -1
Query: 242 GRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRA 81
G W RT P+ PD S SS R+ +SC T S S SSE A
Sbjct: 378 GHNSSWFSRRTTSPSPEPDRLSG-SSSDSRASIVSSCSTTSTDDSSSSSSEESA 430
>AJ276678-1|CAC00655.1| 785|Homo sapiens HEF like Protein protein.
Length = 785
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -1
Query: 242 GRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRA 81
G W RT P+ PD S SS R+ +SC T S S SSE A
Sbjct: 377 GHNSSWFSRRTTSPSPEPDRLSG-SSSDSRASIVSSCSTTSTDDSSSSSSEESA 429
>AF193046-1|AAG22474.1| 277|Homo sapiens unknown protein.
Length = 277
Score = 29.1 bits (62), Expect = 9.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 242 GRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGRALASATK 63
G V +WA TAG QPP + P+ +A+ + + + + EG A+AS +
Sbjct: 17 GCVVLWAQG-TAGQPQPPPPKPPRPQPPPQQVRSATAGSEGGFLAPEYREEGAAVASRVR 75
Query: 62 RR 57
RR
Sbjct: 76 RR 77
>AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced
protein protein.
Length = 530
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 179 IPHPVAVSVPQYVKVPIPQPYP 244
+P+PV V +P V +PIP P P
Sbjct: 232 VPYPVIVPLPVPVPIPIPIPVP 253
>AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase
kappa protein.
Length = 1271
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Frame = +2
Query: 77 PALGLLKNGSPKATR---TQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 247
P L P+AT T+ +T+P + P P P P+ P P+P P
Sbjct: 57 PCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPE 116
Query: 248 HVTVEQP 268
T P
Sbjct: 117 PATESAP 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,779,750
Number of Sequences: 237096
Number of extensions: 1819846
Number of successful extensions: 6760
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6612
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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