Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1400
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 36 0.017
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 35 0.029
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 0.83
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 1.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 1.4
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 29 2.5
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 28 3.3
AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical ... 28 3.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 27 5.8
AC006747-2|AAF60508.1| 264|Caenorhabditis elegans Hypothetical ... 27 5.8
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 27 7.7
U41271-1|AAA82443.1| 215|Caenorhabditis elegans Hypothetical pr... 27 7.7
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 27 7.7
U28943-5|AAA68359.2| 435|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 167 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
I +P P PV VPQ V VP+P P P+ + + P+
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
Score = 35.1 bits (77), Expect = 0.029
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 140 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 262
P + + P+P PV V +P + +P+P P PV V V+
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46
Score = 34.7 bits (76), Expect = 0.039
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 167 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
I +PIP PV V P VP+P P P+ + + P+
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPV 39
Score = 33.9 bits (74), Expect = 0.067
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 173 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
VP+P PV VP + +P+P P P+ V V P+
Sbjct: 13 VPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 33.5 bits (73), Expect = 0.089
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 140 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 259
P + + + VP P P V VP + +P+P P PV V V
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 173 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 271
+P P P+ + P V P+PQP PV + + P+
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPM 33
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 173 VPIPHPVAVSVPQYVKVPIPQPYPVH 250
VP+P PV V VP V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 140 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 259
P V V ++ VP+P P V P Y VP P P P V
Sbjct: 161 PVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAPAATPV 199
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 176 PIPHPVAVS-VPQYVKVPIPQ--PYPVHVTVEQPI 271
P P PVA V Q+V VP+P P P+ V V P+
Sbjct: 142 PCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPV 176
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.63
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 164 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 262
++ P P P V VP PIP P PV ++
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPVTAPIQ 157
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 0.83
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 149 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 247
V V + P+P PV VP+ PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 167 IGVPIPHPVAVSVPQYVKVPIPQPY--PVHVTVEQP 268
+ +P+P PV VP+ V P+P P+ V E+P
Sbjct: 110 VTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEP 145
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 176 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 268
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 116 TRTQ*HTKPYHVTVV-KKIGVPIPHPVAVSVPQYVKVPIP 232
+R Q T +VT++ VPI HP +S+ +K+P+P
Sbjct: 62 SRKQKFTYSQNVTLLPNNTRVPIYHPTCISILSQMKLPVP 101
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 233 EVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGS 102
E+ + T GPT+PP ++L S T+S + ++P GS
Sbjct: 170 EITGTTPTPGPTEPPTTTAKLPSDCDEVESTSSGLQT-IYPDGS 212
>AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical
protein Y82E9BL.18 protein.
Length = 499
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 298 VDNLINRYMDRLLHCNVDRVGLRYGHLHVLRDR 200
VD L+ R + R VDR G+R HL++ +R
Sbjct: 22 VDRLVLRKVSRRFRIQVDRHGIRPRHLYICLNR 54
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 221 PSRTAGPTQPPDGESELRSSSPRSHGTASCVTVCVWPSGSHSSEGR 84
P+RTA T+ + ++ +++P S SC T V P G GR
Sbjct: 76 PARTARRTRRDNYGAQPIAANPPSSAAGSCCTCQVGPPGPPGPPGR 121
>AC006747-2|AAF60508.1| 264|Caenorhabditis elegans Hypothetical
protein Y39A3A.2 protein.
Length = 264
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +3
Query: 201 RSRST*RCPYLNPTRSTLQWSNLSMYLFIRLSTKLLKNQYRTRSKNQCPMKSKSLMPLRS 380
R+ ++ +CP+L + L+W N + ++ ST L ++ +++ CP K+ ++ P +
Sbjct: 88 RNETSDQCPFLAFNTTELEWLNNDVIHNLKFSTDDLYYRFEL-TRSVCP-KNSTVFPRTT 145
Query: 381 K 383
K
Sbjct: 146 K 146
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.1 bits (57), Expect = 7.7
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +3
Query: 12 RTSVRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHSNTRSRTM*PW*RRSEFRFPIR 191
RT ++H R ++ S RS +RP S +RSR+ P + R R
Sbjct: 325 RTPAQRHSRRSESTSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRTR 384
Query: 192 WLCRSRST*RCPYLNPTRS 248
+S ST P L+P+RS
Sbjct: 385 SQAKSSSTLTWP-LSPSRS 402
>U41271-1|AAA82443.1| 215|Caenorhabditis elegans Hypothetical
protein C46H3.1 protein.
Length = 215
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 302 LGGQPYKQVHG*VAP-L*RGPGRV-EVWAPSRTAGPTQPPDGE 180
+GGQPY +H + P L R P + +P T GP PP G+
Sbjct: 50 MGGQPYPNLHSSLRPDLMRNPQPYGTMRSPQPTMGPV-PPYGQ 91
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 107 PKATRTQ*HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPY 241
P+ T +Q + +V + G P+ P + P+ V +P PY
Sbjct: 247 PRPTTSQSNGPVIKTVIVDERGAPMNQPTSTQKPKVVHKFLPNPY 291
>U28943-5|AAA68359.2| 435|Caenorhabditis elegans Hypothetical
protein E04F6.6 protein.
Length = 435
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 109 EGHTHTVTHEAVPCDRGEEDRSSDSPSGGCVGPAVREGAH 228
EG TH V +VP GE + GG VGP ++ H
Sbjct: 352 EGDTHAVV--SVPLKPGEAGKPIGVDVGGGVGPYYQQNQH 389
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,370,711
Number of Sequences: 27780
Number of extensions: 269980
Number of successful extensions: 1032
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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