Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1395
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   7.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   7.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   7.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   7.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   7.0  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              20   9.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 123 FEWRCPFFP 97
           F+W+ PF+P
Sbjct: 285 FDWQKPFYP 293


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 123 FEWRCPFFP 97
           F+W+ PF+P
Sbjct: 285 FDWQKPFYP 293


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 140 YSLMYNLSGDVLSSLYKNLYLS 75
           Y+    +SG  LS +  NLY S
Sbjct: 247 YTAQDGISGMALSPMTNNLYYS 268


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 140 YSLMYNLSGDVLSSLYKNLYLS 75
           Y+    +SG  LS +  NLY S
Sbjct: 247 YTAQDGISGMALSPMTNNLYYS 268


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 140 YSLMYNLSGDVLSSLYKNLYLS 75
           Y+    +SG  LS +  NLY S
Sbjct: 247 YTAQDGISGMALSPMTNNLYYS 268


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 184 IKLFLILRCVYKYLFIH 134
           IK+  IL C +KY  I+
Sbjct: 114 IKISKILECFFKYKTIN 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,880
Number of Sequences: 438
Number of extensions: 1442
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)