Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1394
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 186 1e-47
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 57 8e-09
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 40 0.001
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 1.0
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 1.0
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 1.0
AC006701-3|AAF60394.2| 198|Caenorhabditis elegans Mediator prot... 29 1.8
Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 29 2.3
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 29 2.3
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 28 4.1
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 5.4
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical pr... 27 9.4
U40943-4|AAK39236.1| 270|Caenorhabditis elegans Hypothetical pr... 27 9.4
U40943-3|AAM69117.1| 325|Caenorhabditis elegans Hypothetical pr... 27 9.4
U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical pr... 27 9.4
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 27 9.4
AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic AMP-de... 27 9.4
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 27 9.4
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 27 9.4
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 27 9.4
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 186 bits (452), Expect = 1e-47
Identities = 86/181 (47%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
Frame = +3
Query: 30 LQQDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSK 209
L D VVTKY++A +I N VL++V+A A A ++C+ GDKL+LE+T K++KKEK+
Sbjct: 23 LANDAVVTKYQVAAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNFT 82
Query: 210 KGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVXVG--- 380
KGIA TC+S++NCICH++P+ SE +LK G + K+DLG HIDG IA AHTV VG
Sbjct: 83 KGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGASK 142
Query: 381 ESEVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLK 560
+++V+G+ AD+ +P TEN +T+ I K +AE+G PIE MLSHQL+
Sbjct: 143 DNKVTGKLADLLRGTHDALEIAIRSLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQLE 202
Query: 561 Q 563
+
Sbjct: 203 R 203
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 57.2 bits (132), Expect = 8e-09
Identities = 37/121 (30%), Positives = 63/121 (52%)
Frame = +3
Query: 9 KKKSKKRLQQDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 188
++K + + V Y+ + + +V + V + P + EICE LE T++
Sbjct: 117 EEKKALDISYEEVWQDYRRSAEAHRQVRKYVKSWIKPGMTMIEICER-----LETTSRRL 171
Query: 189 KKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHT 368
KE+ + G+AF T S+N+C H++P A + +L+ GD+ KID G H+ G + A T
Sbjct: 172 IKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRGRLIDSAFT 230
Query: 369 V 371
V
Sbjct: 231 V 231
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/109 (26%), Positives = 44/109 (40%)
Frame = +3
Query: 225 STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVXVGESEVSGRA 404
S C SVN ICH P + L+ GDL +D+ + GF + T VG+ +V +
Sbjct: 173 SCCTSVNEVICHGIPDMRK----LENGDLCNVDVTVYHRGFHGDLNETFLVGD-KVDEES 227
Query: 405 ADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSH 551
+ KPG + + IQK + G ++G H
Sbjct: 228 RKLVKVTFECLQQAIAIVKPGVKFREIGNVIQKHANANGFSVVKGYCGH 276
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 199 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 62
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 199 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 62
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 199 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 62
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 400 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 442
>AC006701-3|AAF60394.2| 198|Caenorhabditis elegans Mediator protein
20 protein.
Length = 198
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 97 CSRTRFTICPANLYLVTTKSCCNRFFD 17
C ++ F+ICP + + + K+ C+R FD
Sbjct: 58 CPQSTFSICPKDTFKKSPKAVCDRGFD 84
>Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical
protein C06B3.2 protein.
Length = 665
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 LESFSFLKTLLVSSNTSLSPNSHISLADA-SGTHFAMTCSRTRFTICPANLYLVTTKSCC 32
L SFSF N S P +HI D G A S L+ KS
Sbjct: 246 LYSFSFWTNASTILNVSSQPATHIKCLDCIRGLSMAWVLSGHMLNYFAFADTLMPIKSFA 305
Query: 31 NRFFDFFFVS 2
N F D+FF++
Sbjct: 306 NYFADYFFMN 315
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 138 ICEFGDKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDL 311
I +FG+++ L ET + ++KD SK +TC + + PI D +++ D
Sbjct: 319 IDQFGERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DS 377
Query: 312 AKIDLG 329
+DLG
Sbjct: 378 CTMDLG 383
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 138 ICEFGDKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDL 311
I +FG+++ L ET + ++KD SK +TC + + PI D +++ D
Sbjct: 319 IDQFGERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DS 377
Query: 312 AKIDLG 329
+DLG
Sbjct: 378 CTMDLG 383
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 141 CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 320
C+FGDK + E +K+ K FS C + +P+A + + I KKG++ K+
Sbjct: 72 CKFGDKCL--EDHKIPKPGTRLCGSCRFSKCEQMG-----MNPMAIKSEIISKKGNILKM 124
Query: 321 DL 326
+L
Sbjct: 125 EL 126
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 360 AHTVXVGESEVSGRAAD 410
AH + +GESE++G AAD
Sbjct: 350 AHPIHIGESEIAGHAAD 366
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 464 RLQETKSRFTSMMSCQQNICSTSRDFTFTHXYCMSYNSYKSINVSTK 324
RL + S +T+ +C Q C T + T+T C+ N + +TK
Sbjct: 709 RLLSSWSEWTTTGTCNQTACGTCQTLTYTRT-CLKTNGCFCMGSATK 754
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 467 TRLQETKSRFTSMMSCQQNICSTSRDFTFTHXY 369
T L T S F M+ ++ + +T DFTFTH +
Sbjct: 188 TFLPITISPFGDKMTFKERLLNTLADFTFTHIF 220
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 467 TRLQETKSRFTSMMSCQQNICSTSRDFTFTHXY 369
T L T S F M+ ++ + +T DFTFTH +
Sbjct: 188 TFLPITISPFGDKMTFKERLLNTLADFTFTHIF 220
>Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical
protein F22B5.6 protein.
Length = 223
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 178 LVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPANLYLV 50
++S N S I +A+ THF +TC T F +L +V
Sbjct: 57 IISWNMLNSSRGKIVNENATNTHFGLTCVTTAFLCILTSLIIV 99
>Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical
protein F38B7.4 protein.
Length = 325
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/89 (21%), Positives = 37/89 (41%)
Frame = -3
Query: 308 ISFFQNVIRFARNGRKVTNAVVHRNAC*KCNAFLGVFLLFENLVSLLQYKFIAKFTYFSC 129
++ F + +F +N K R K N +L + + ++ + L+ F F F
Sbjct: 207 VATFAKIFKFYKNQNKTDKESRKRI---KKNIYLFIQTVLQDSLYLIDISFTFYFNSFYD 263
Query: 128 *CVWNAFCDDLLKDSVHYLSC*LVLGHNQ 42
W FC + S+H L +++ N+
Sbjct: 264 YRFWTFFCGTFVWQSLHSLDGFIMIMFNE 292
>U40943-4|AAK39236.1| 270|Caenorhabditis elegans Hypothetical
protein F47F2.1a protein.
Length = 270
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -1
Query: 253 MQLFTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 74
M F + + A+ ++ S + L N LS HI +AD FA +TI
Sbjct: 61 MARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---FAKELRDRTYTI 117
Query: 73 CPANLYL 53
C YL
Sbjct: 118 CGTPDYL 124
>U40943-3|AAM69117.1| 325|Caenorhabditis elegans Hypothetical
protein F47F2.1c protein.
Length = 325
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -1
Query: 253 MQLFTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 74
M F + + A+ ++ S + L N LS HI +AD FA +TI
Sbjct: 116 MARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---FAKELRDRTYTI 172
Query: 73 CPANLYL 53
C YL
Sbjct: 173 CGTPDYL 179
>U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical
protein F47F2.1b protein.
Length = 398
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -1
Query: 253 MQLFTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 74
M F + + A+ ++ S + L N LS HI +AD FA +TI
Sbjct: 189 MARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---FAKELRDRTYTI 245
Query: 73 CPANLYL 53
C YL
Sbjct: 246 CGTPDYL 252
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 306 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 199
+LF E N RS W +S CSCS K+ + L SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501
>AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic
AMP-dependent protein kinase,catalytic subunit protein.
Length = 371
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -1
Query: 253 MQLFTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 74
M F + + A+ ++ S + L N LS HI +AD FA +TI
Sbjct: 162 MARFYASEIVCALEYIHSLGIVYRDLKPENLMLSKEGHIKMADFG---FAKELRDRTYTI 218
Query: 73 CPANLYL 53
C YL
Sbjct: 219 CGTPDYL 225
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 306 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 199
+LF E N RS W +S CSCS K+ + L SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 306 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 199
+LF E N RS W +S CSCS K+ + L SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 306 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 199
+LF E N RS W +S CSCS K+ + L SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,566,513
Number of Sequences: 27780
Number of extensions: 251397
Number of successful extensions: 890
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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