Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1391
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    36   0.12 
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    36   0.16 
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    32   1.9  
AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    31   4.5  

>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 36.3 bits (80), Expect = 0.12
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 405 VILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLKCICVS 545
           V +CVC+  C+ +F  + C+CV   V  +  + +S  V    C+CVS
Sbjct: 35  VSVCVCICVCVSVFVCV-CICVCVCVCVSMCVSISVCVYLCLCVCVS 80



 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +3

Query: 408 ILCVCVTNCLFLFNFIWCVCV---ICLVFNAFV-IRVSYNVITLKCICV 542
           + CV V+ CL+L+  + C+CV   +C+  +  V I V  +V    CICV
Sbjct: 8   VSCVSVSVCLYLYVCV-CICVSVCVCICVSVCVCICVCVSVFVCVCICV 55



 Score = 30.3 bits (65), Expect = 7.8
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +3

Query: 309 INVFTCFRFSCCV**LCN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIW-CVCVICLVF 485
           ++V  C   S CV  +C   +  +V +     V +CVCV+ C+ +   ++ C+CV C+  
Sbjct: 27  VSVCVCICVSVCVC-IC---VCVSVFVCVCICVCVCVCVSMCVSISVCVYLCLCV-CVSV 81

Query: 486 NAFVIRVSYNVITLKCICV 542
             +V    Y  + L C+CV
Sbjct: 82  CVYVSVCMYLCVFL-CVCV 99


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
 Frame = +3

Query: 369 LG*TVLLNFITLVILCVCVTNCLFLFNFIW-----CVCV---ICLVFNAFV-IRVSYNVI 521
           +G  V + F   V +C+CV  C+ +F  +W     CVCV   +CL    F+ + V  +V 
Sbjct: 117 VGLCVSVCFCVSVCVCLCVCVCICVFVCVWVCVCLCVCVCLCVCLCLCVFLCVCVFVSVC 176

Query: 522 TLKCICV 542
              C+CV
Sbjct: 177 VSVCVCV 183



 Score = 33.9 bits (74), Expect = 0.64
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +3

Query: 306 SINVFTCFRFSCCV**LCN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIW---CVCVIC 476
           S++V  C   S C+  +C  ++   V L     V LCVC+  C+ +  F+    CVCV  
Sbjct: 47  SVSVCLCVCVSVCLC-VCLVSVCLCVCLCVCVSVCLCVCLHLCVCVCGFVCLCLCVCVCL 105

Query: 477 LVFNAFVIRVSYNVITLKCICVS 545
            V     + V   +    C CVS
Sbjct: 106 CVCVCLHLCVCVGLCVSVCFCVS 128



 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 411 LCVCVTNCLFLFNFIWCVCV-ICLVFNAFVIRVSYNVITLKCICVS 545
           +CVCV  C+   +   CVC+ +C+     +     +V    C+CVS
Sbjct: 12  VCVCVCVCVLCVSVCVCVCLCVCVCVCVCLCLCVLSVSVCLCVCVS 57



 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 411 LCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLKCICV 542
           LCVCV  C+ +   + CVCV   V   F + V   +    CICV
Sbjct: 99  LCVCVCLCVCVCLHL-CVCVGLCVSVCFCVSVCVCLCVCVCICV 141


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +3

Query: 381 VLLNFITLVILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLKCICV 542
           V     T   +CVCV   +++  ++ CVC    +     + V   + T  C+CV
Sbjct: 175 VYTRIYTYTCMCVCVHTHIYIHMYV-CVCTHAYIHTHVYVCVYTRIYTYTCMCV 227



 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 399 TLVILCVCVTNCLFLFNFIW-CVCVICLVFNAFVIRVSYNVITLKCICV 542
           T +  C CV  C+    +   CVCV   ++    + V   + T  C+CV
Sbjct: 63  THIYACTCVCVCVHTHTYTCICVCVHTHIYIHMCVCVYTRIYTYTCVCV 111



 Score = 30.3 bits (65), Expect = 7.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 414 CVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLKCICV 542
           CVCV    ++   + CVCV   ++    + V   + T  C+CV
Sbjct: 108 CVCVCTHAYIHTHV-CVCVHTHIYIHMYVCVYTRIYTYTCVCV 149


>AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38312 fis, clone FCBBF3021506. ).
          Length = 134

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 405 VILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLKCICV 542
           V +C  + +C+F++  I CVC+   VF    + V   V    C+CV
Sbjct: 48  VFVCAHMCSCVFVYVCI-CVCLYVCVFVCVCMYVYLCVFVCMCLCV 92



 Score = 30.7 bits (66), Expect = 5.9
 Identities = 24/86 (27%), Positives = 38/86 (44%)
 Frame = +3

Query: 333 FSCCV**LCN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSY 512
           + CCV  +C   L   V +     V +C+CV  C+++   + CVCV C+   A +     
Sbjct: 4   YVCCVC-MCRWCL--CVCIYMCVCVPVCMCVYVCVYVRICVICVCV-CVFVCAHMCSC-- 57

Query: 513 NVITLKCICVS**QLFIKCI*HYIMI 590
            V    CICV        C+  Y+ +
Sbjct: 58  -VFVYVCICVCLYVCVFVCVCMYVYL 82


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +3

Query: 399 TLVILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLKCICV 542
           T V +C CV  C F+     C CV    F    + V  ++    C+CV
Sbjct: 165 TFVCVCACVCGCTFV---CVCACVCGCTFVCVCLCVWVHICVCVCLCV 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,708,404
Number of Sequences: 237096
Number of extensions: 1308528
Number of successful extensions: 2296
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2256
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)