Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1391
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010069-1|AAQ22538.1|  314|Drosophila melanogaster LD13050p pro...    30   3.0  
AF253528-2|AAF71285.1|  314|Drosophila melanogaster proteolipid ...    30   3.0  
AF253528-1|AAF71284.1|  248|Drosophila melanogaster proteolipid ...    30   3.0  
AE014296-3552|AAN12170.1|  314|Drosophila melanogaster CG7540-PB...    30   3.0  
AE014296-3551|AAF51736.1|  314|Drosophila melanogaster CG7540-PA...    30   3.0  
AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA...    30   3.9  

>BT010069-1|AAQ22538.1|  314|Drosophila melanogaster LD13050p
           protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 357 CN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIWCVC 467
           C   +G T LLNF+  +ILC  V    F++   W +C
Sbjct: 172 CAVLMGITYLLNFVWSLILCFLVV-VTFIYTMFWNMC 207



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 408 ILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVIT 524
           I C  +    +L NF+W + +  LV   F+  + +N+ T
Sbjct: 170 ISCAVLMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCT 208


>AF253528-2|AAF71285.1|  314|Drosophila melanogaster proteolipid
           protein M6-2 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 357 CN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIWCVC 467
           C   +G T LLNF+  +ILC  V    F++   W +C
Sbjct: 172 CAVLMGITYLLNFVWSLILCFLVV-VTFIYTMFWNMC 207



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 408 ILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVIT 524
           I C  +    +L NF+W + +  LV   F+  + +N+ T
Sbjct: 170 ISCAVLMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCT 208


>AF253528-1|AAF71284.1|  248|Drosophila melanogaster proteolipid
           protein M6-1 protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 357 CN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIWCVC 467
           C   +G T LLNF+  +ILC  V    F++   W +C
Sbjct: 106 CAVLMGITYLLNFVWSLILCFLVV-VTFIYTMFWNMC 141



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 408 ILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVIT 524
           I C  +    +L NF+W + +  LV   F+  + +N+ T
Sbjct: 104 ISCAVLMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCT 142


>AE014296-3552|AAN12170.1|  314|Drosophila melanogaster CG7540-PB,
           isoform B protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 357 CN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIWCVC 467
           C   +G T LLNF+  +ILC  V    F++   W +C
Sbjct: 172 CAVLMGITYLLNFVWSLILCFLVV-VTFIYTMFWNMC 207



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 408 ILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVIT 524
           I C  +    +L NF+W + +  LV   F+  + +N+ T
Sbjct: 170 ISCAVLMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCT 208


>AE014296-3551|AAF51736.1|  314|Drosophila melanogaster CG7540-PA,
           isoform A protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 357 CN*TLG*TVLLNFITLVILCVCVTNCLFLFNFIWCVC 467
           C   +G T LLNF+  +ILC  V    F++   W +C
Sbjct: 172 CAVLMGITYLLNFVWSLILCFLVV-VTFIYTMFWNMC 207



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 408 ILCVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVIT 524
           I C  +    +L NF+W + +  LV   F+  + +N+ T
Sbjct: 170 ISCAVLMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCT 208


>AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA
           protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 414 CVCVTNCLFLFNFIWCVCVICLVFNAFVIRVSYNVITLK 530
           CVCV  C+  F  + CV  I   +NA +I++ Y +ITL+
Sbjct: 161 CVCVCVCVIGFCVV-CV-YISYEYNACIIKILYFMITLR 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,178,840
Number of Sequences: 53049
Number of extensions: 453291
Number of successful extensions: 1042
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)