Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1378
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021323-1|AAX33471.1| 1301|Drosophila melanogaster RE07880p pro...    29   7.5  
AY113646-1|AAM29651.1|  576|Drosophila melanogaster RH74685p pro...    29   7.5  
AF255667-1|AAG01794.1|  536|Drosophila melanogaster Stretchin-ML...    29   7.5  
AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P...    29   7.5  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    29   7.5  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   7.5  
AE013599-1981|AAM68539.2| 1301|Drosophila melanogaster CG10249-P...    29   7.5  

>BT021323-1|AAX33471.1| 1301|Drosophila melanogaster RE07880p
           protein.
          Length = 1301

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 237 RSYNCICYGTHDELLTERYISSLAINTETKEKK 139
           RS NC  YG H +L   RY  +LA+   ++E++
Sbjct: 42  RSCNCCPYGYHIDLDFVRYCEALALEKPSEEEQ 74


>AY113646-1|AAM29651.1|  576|Drosophila melanogaster RH74685p
           protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 231 YNCICYGTHDELLTERYISSLAINTETKEKKISIVNSI 118
           Y CI  G HD L+T   ++    NTE + ++  I   +
Sbjct: 358 YTCIISGDHDPLITSTTVTFHDSNTEIRRRRAVITERL 395


>AF255667-1|AAG01794.1|  536|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 231 YNCICYGTHDELLTERYISSLAINTETKEKKISIVNSI 118
           Y CI  G HD L+T   ++    NTE + ++  I   +
Sbjct: 290 YTCIISGDHDPLITSTTVTFHDSNTEIRRRRAVITERL 327


>AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF,
           isoform F protein.
          Length = 1506

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 231 YNCICYGTHDELLTERYISSLAINTETKEKKISIVNSI 118
           Y CI  G HD L+T   ++    NTE + ++  I   +
Sbjct: 373 YTCIISGDHDPLITSTTVTFHDSNTEIRRRRAVITERL 410


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 231  YNCICYGTHDELLTERYISSLAINTETKEKKISIVNSI 118
            Y CI  G HD L+T   ++    NTE + ++  I   +
Sbjct: 3330 YTCIISGDHDPLITSTTVTFHDSNTEIRRRRAVITERL 3367


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 231  YNCICYGTHDELLTERYISSLAINTETKEKKISIVNSI 118
            Y CI  G HD L+T   ++    NTE + ++  I   +
Sbjct: 8137 YTCIISGDHDPLITSTTVTFHDSNTEIRRRRAVITERL 8174


>AE013599-1981|AAM68539.2| 1301|Drosophila melanogaster CG10249-PC,
           isoform C protein.
          Length = 1301

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 237 RSYNCICYGTHDELLTERYISSLAINTETKEKK 139
           RS NC  YG H +L   RY  +LA+   ++E++
Sbjct: 42  RSCNCCPYGYHIDLDFVRYCEALALEKPSEEEQ 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,185,771
Number of Sequences: 53049
Number of extensions: 544100
Number of successful extensions: 992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)