Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1377
(336 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 24 0.57
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 1.3
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 1.3
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 3.0
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 3.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.0
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 21 4.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 7.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 9.2
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 20 9.2
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 23.8 bits (49), Expect = 0.57
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 102 NYFTQGIYFHHLVFKSVRSQQELSR 28
+YF + IYFH +V S+ + + R
Sbjct: 453 SYFIEPIYFHSIVLGSLLNPSHMYR 477
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 230 GWDWCAPVLGRRRYPGEGTRCTCSVN 307
GW AP+ G RY EG C +
Sbjct: 181 GWT-IAPMFGWNRYVPEGNMTACGTD 205
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 22.6 bits (46), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 230 GWDWCAPVLGRRRYPGEGTRCTCSVN 307
GW AP+ G RY EG C +
Sbjct: 57 GWT-IAPMFGWNRYVPEGNMTACGTD 81
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.4 bits (43), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 116 SSSTGRSGKCWACGGSRLGRPGHI--HRC 196
+S+TG S +C+ C S L + HI H C
Sbjct: 82 ASTTGFSKECYCCRESYL-KERHITLHHC 109
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.4 bits (43), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 116 SSSTGRSGKCWACGGSRLGRPGHI--HRC 196
+S+TG S +C+ C S L + HI H C
Sbjct: 82 ASTTGFSKECYCCRESYL-KERHITLHHC 109
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.0
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 306 LTLQVQRVPSPGYLRLPSTGAHQSHPLQGPTT 211
L Q P+P Y TG+ L GP T
Sbjct: 257 LVCVAQACPTPEYRWYAQTGSEPMLVLSGPRT 288
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.0
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 306 LTLQVQRVPSPGYLRLPSTGAHQSHPLQGPTT 211
L Q P+P Y TG+ L GP T
Sbjct: 257 LVCVAQACPTPEYRWYAQTGSEPMLVLSGPRT 288
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 21.0 bits (42), Expect = 4.0
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -2
Query: 152 MPNTSRIDRS 123
+PNTSR+D+S
Sbjct: 97 VPNTSRLDKS 106
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.2 bits (40), Expect = 7.0
Identities = 8/26 (30%), Positives = 10/26 (38%)
Frame = -1
Query: 231 PLQGPTTLHWWLHR*MCPGRPNLEPP 154
P + P HW + C P PP
Sbjct: 376 PSKNPAMGHWQMSCVACSPPPRQTPP 401
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 19.8 bits (39), Expect = 9.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 110 ERRTISPKAYTFIISFLKASAVNKNSAARKLR 15
ERR SP + + A++ KN+ +R+ R
Sbjct: 671 ERRIYSPITFQDVARRSVANSPTKNADSREYR 702
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -2
Query: 101 TISPKAYTFIISFLKASAVNKNSAARKLRH 12
T++P+A I L + + +A+ L+H
Sbjct: 138 TVTPEAKNLINQMLTVNPSKRITASEALKH 167
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,779
Number of Sequences: 438
Number of extensions: 2384
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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