Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1375
         (372 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   0.50 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.2  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 4   SASRRSSTAPGVSGTTAATEARTSGPTSGSRGTASPLRRTTED-TSDRMATVMSIT 168
           SA   SS  PG +   A    R S  +  S GTAS    T     SDR A   S++
Sbjct: 149 SAPTGSSCGPGAAAAAALLSKRRS-VSECSLGTASSTSSTASSRNSDRSAGSPSVS 203


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 259 FRWPSTLPTRASASTRTECTLNRNART 339
           F+W  ++    S+S+ T   +N N +T
Sbjct: 420 FQWDDSVSAGFSSSSNTWLRVNENYKT 446


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 259 FRWPSTLPTRASASTRTECTLNRNART 339
           F+W  ++    S+S+ T   +N N +T
Sbjct: 420 FQWDDSVSAGFSSSSNTWLRVNENYKT 446


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 4   SASRRSSTAPGVSGTTAATEARTSGPTS 87
           +A+  +ST+P  + +TAAT   +  P++
Sbjct: 833 AATSSTSTSPRPASSTAATLVLSGCPSN 860


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.121    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,360
Number of Sequences: 438
Number of extensions: 1705
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)