Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1373
         (526 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006029-1|AAO85563.1|  351|Drosophila melanogaster LD01876p pro...    77   2e-14
AE014297-2341|AAF55411.1|  677|Drosophila melanogaster CG5319-PA...    77   2e-14
AY058748-1|AAL13977.1|  694|Drosophila melanogaster LP10161p pro...    35   0.059
AE014298-2999|AAF50925.1|  694|Drosophila melanogaster CG17068-P...    35   0.059
AE014297-1230|AAF54577.1|  457|Drosophila melanogaster CG14696-P...    31   1.3  

>BT006029-1|AAO85563.1|  351|Drosophila melanogaster LD01876p
           protein.
          Length = 351

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
 Frame = +1

Query: 370 DPNWQATKPTVRERNAAMFNNQLMSDITFIVGAP---GHTKIIPAHKYVLATASS 525
           DPNWQA+K TV ERNAAMFNN+LMSD+ FIVG        + IPAHKY+LAT SS
Sbjct: 188 DPNWQASKATVLERNAAMFNNELMSDVKFIVGGEFDIDPIQTIPAHKYILATGSS 242



 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 148 SRDSMSVAQTNT-WMNAENINNGGGLSLSPPHTVSQRETGTQ 270
           +++SMS +Q N  W+N E +NNG GL  SPPH   Q++   Q
Sbjct: 33  NQESMSHSQPNGGWINVETLNNGNGLLHSPPHNHQQQQQQQQ 74


>AE014297-2341|AAF55411.1|  677|Drosophila melanogaster CG5319-PA
           protein.
          Length = 677

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
 Frame = +1

Query: 370 DPNWQATKPTVRERNAAMFNNQLMSDITFIVGAP---GHTKIIPAHKYVLATASS 525
           DPNWQA+K TV ERNAAMFNN+LMSD+ FIVG        + IPAHKY+LAT SS
Sbjct: 188 DPNWQASKATVLERNAAMFNNELMSDVKFIVGGEFDIDPIQTIPAHKYILATGSS 242



 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 148 SRDSMSVAQTNT-WMNAENINNGGGLSLSPPHTVSQRETGTQ 270
           +++SMS +Q N  W+N E +NNG GL  SPPH   Q++   Q
Sbjct: 33  NQESMSHSQPNGGWINVETLNNGNGLLHSPPHNHQQQQQQQQ 74


>AY058748-1|AAL13977.1|  694|Drosophila melanogaster LP10161p
           protein.
          Length = 694

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +1

Query: 367 LDPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 522
           +D +WQ     +++R   + +++  +D  F+VG+    ++I  HK +LA AS
Sbjct: 1   MDIDWQNGLTELKDRGQYLLHSEKWADCRFLVGSSPTQRLIAGHKLLLAMAS 52


>AE014298-2999|AAF50925.1|  694|Drosophila melanogaster CG17068-PA
           protein.
          Length = 694

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +1

Query: 367 LDPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 522
           +D +WQ     +++R   + +++  +D  F+VG+    ++I  HK +LA AS
Sbjct: 1   MDIDWQNGLTELKDRGQYLLHSEKWADCRFLVGSSPTQRLIAGHKLLLAMAS 52


>AE014297-1230|AAF54577.1|  457|Drosophila melanogaster CG14696-PA
           protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 328 TWSHLMTHKVREARYSTETPVYQSLAVIQCVVETGK 221
           T   L+TH   E  YST+ PVY      Q  + TGK
Sbjct: 65  TTKSLVTHTTTEVYYSTDQPVYGQAGGSQLELPTGK 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,147,080
Number of Sequences: 53049
Number of extensions: 503569
Number of successful extensions: 1393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)