Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1373
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    50   8e-07
Z70718-2|CAA94676.1|  373|Caenorhabditis elegans Hypothetical pr...    30   0.88 
Z68301-2|CAA92625.1|  366|Caenorhabditis elegans Hypothetical pr...    30   0.88 
AF125442-12|AAD12797.1|  260|Caenorhabditis elegans Hypothetical...    30   1.2  
Z92831-3|CAC70085.1|  276|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U21323-15|AAA62546.2|  290|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81121-3|CAJ80825.1|  501|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z70308-15|CAJ80814.1|  501|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z70308-7|CAA94352.1|  508|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kin...    27   8.2  

>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +1

Query: 379 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 522
           WQA K T+RER   M+ N+ ++D+ F+VG     + IPAHK+VL+  S
Sbjct: 168 WQADKKTLRERIEHMYCNETLADVFFVVGIDDSRQRIPAHKFVLSIGS 215


>Z70718-2|CAA94676.1|  373|Caenorhabditis elegans Hypothetical
           protein C04G2.2 protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 0.88
 Identities = 10/17 (58%), Positives = 16/17 (94%)
 Frame = +3

Query: 30  RVSNVWNLLFIIIKLNG 80
           RV ++W+LLF++I+LNG
Sbjct: 221 RVDDIWSLLFVLIELNG 237


>Z68301-2|CAA92625.1|  366|Caenorhabditis elegans Hypothetical
           protein W01B6.2 protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 0.88
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = +3

Query: 30  RVSNVWNLLFIIIKLNG 80
           RV +VW+LL++II+LNG
Sbjct: 222 RVDDVWSLLYVIIELNG 238


>AF125442-12|AAD12797.1|  260|Caenorhabditis elegans Hypothetical
           protein H04M03.12 protein.
          Length = 260

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -1

Query: 325 WSHLMTHKVREARYSTETPVYQSLAVIQCVVETGKARHHC*YFLHSSKYWF 173
           W HL + +V   RYS     Y+   +   + E  K +H   +FL+     F
Sbjct: 99  WRHLSSERVSIYRYSLPAITYEMSFIKFIIQEISKLQHQTHFFLYKQNLLF 149


>Z92831-3|CAC70085.1|  276|Caenorhabditis elegans Hypothetical
           protein F22G12.6 protein.
          Length = 276

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 415 AAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLA 513
           +++      SD+TF   A    K +PAHKYVLA
Sbjct: 54  SSLLEKPRFSDVTFKF-AGNSLKSVPAHKYVLA 85


>U21323-15|AAA62546.2|  290|Caenorhabditis elegans Hypothetical
           protein C45G9.1 protein.
          Length = 290

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 30  RVSNVWNLLFIIIKLNG 80
           RV +VW+L ++II+LNG
Sbjct: 155 RVDDVWSLPYVIIELNG 171


>Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


>Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


>Z81121-3|CAJ80825.1|  501|Caenorhabditis elegans Hypothetical
           protein F49E11.1e protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 25  SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 74


>Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


>Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


>Z70308-15|CAJ80814.1|  501|Caenorhabditis elegans Hypothetical
           protein F49E11.1e protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 25  SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 74


>Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


>Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


>Z70308-7|CAA94352.1|  508|Caenorhabditis elegans Hypothetical
           protein F49E11.1a protein.
          Length = 508

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 32  SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 81


>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
           protein F13B9.1a protein.
          Length = 1632

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 124 KPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVSQRETGTQV 273
           +P K +   R S   +     +NA +I N G L  + PH+     TG Q+
Sbjct: 840 EPPKSIIAKRQSDMNSVCEESLNAYDIYNNGPLKFTCPHSFMNISTGGQI 889


>AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kinase
           2 protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 NLCSRIVSKPQKRLQDSRDSMSVAQTNTWMNAENINNGGGLSLSPPHTVS 249
           +L ++ +  P K L  S  +++ A T+  M+++   +    SLS  HT S
Sbjct: 326 SLMTQSIGGPNKHLSASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSS 375


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,227,330
Number of Sequences: 27780
Number of extensions: 255488
Number of successful extensions: 660
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)