Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1372
         (301 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    28   0.066
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   0.27 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   0.27 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   1.9  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    22   4.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   7.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    21   7.6  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 28.3 bits (60), Expect = 0.066
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 102 QHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRR 200
           QH+  RP+RS + NP       GR H  C+SRR
Sbjct: 281 QHLSHRPQRSTRKNP------AGRQHDRCDSRR 307


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 252 NGDATVLFVLTRVSETGLSGSRTSND 175
           +GD T L  +T ++E+G+  S TS D
Sbjct: 194 SGDETDLDAITTLAESGIPSSNTSGD 219



 Score = 25.0 bits (52), Expect = 0.62
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 176 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 286
           S L + PER  SLT++  + + AS   L  S  SS+L
Sbjct: 666 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 702


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 252 NGDATVLFVLTRVSETGLSGSRTSND 175
           +GD T L  +T ++E+G+  S TS D
Sbjct: 195 SGDETDLDAITTLAESGIPSSNTSGD 220



 Score = 25.0 bits (52), Expect = 0.62
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 176 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 286
           S L + PER  SLT++  + + AS   L  S  SS+L
Sbjct: 667 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 703


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 93  EYPQHVCDRPRRSRQVNPHGLVGFQG 170
           ++P HVC+R  R+  +N   +V   G
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHG 375


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 21  KNHKPSKMVNFTVDEIRGM 77
           K+ +P+K  N T+  +RG+
Sbjct: 96  KSDRPAKFPNLTIKYVRGL 114


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 109  TCCGYSAYLSIIPRISSTVKFTILD 35
            +C G+S+ ++IIP+  S  +    D
Sbjct: 3161 SCFGHSSTVTIIPKFESNPRIENAD 3185


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 137 SQPSRTRWFPRPVSLLVREPERPVSLTRVR 226
           SQP  TR+ P P + +   P  P+    VR
Sbjct: 107 SQPPTTRFAPEPRAEVKFVPSVPLKTPPVR 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,284
Number of Sequences: 2352
Number of extensions: 6509
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)