Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1370
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    33   0.078
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    33   0.078
U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase prote...    30   0.73 
AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase pro...    30   0.73 
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr...    30   0.96 
AF022971-4|AAG23982.2|  579|Caenorhabditis elegans Hypothetical ...    29   2.2  
AB007815-1|BAA28351.1|  579|Caenorhabditis elegans matrix metall...    29   2.2  
AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical ...    28   3.9  
AL031620-4|CAA20925.1|  456|Caenorhabditis elegans Hypothetical ...    27   9.0  

>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 33.5 bits (73), Expect = 0.078
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 18  EHLDKMVAKFFIILALVAVASAGDYSNFAYSVADPYTGDFKNQVESR 158
           + LD  + K F         ++ DY+N A S  DP+T DF  Q+ +R
Sbjct: 42  DELDPFLEKLFDTSECEDFVTSSDYTNIATSKCDPHTCDFPRQICAR 88


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 33.5 bits (73), Expect = 0.078
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 18  EHLDKMVAKFFIILALVAVASAGDYSNFAYSVADPYTGDFKNQVESR 158
           + LD  + K F         ++ DY+N A S  DP+T DF  Q+ +R
Sbjct: 42  DELDPFLEKLFDTSECEDFVTSSDYTNIATSKCDPHTCDFPRQICAR 88


>U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase protein
           2 protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 0.73
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   DKVTTEHLDKMVAKFFIILALVAVASAG-DYSNFAYSVADPYTGDFKNQVESRL 161
           D  + EHLD +  K  +   L A A +G D+S+  ++V  PY G   +   S+L
Sbjct: 263 DLESAEHLDTLEKKCVLWGDLAAAAESGRDFSSRFFAVHGPYAGQLASTRTSQL 316


>AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase
           protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 0.73
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   DKVTTEHLDKMVAKFFIILALVAVASAG-DYSNFAYSVADPYTGDFKNQVESRL 161
           D  + EHLD +  K  +   L A A +G D+S+  ++V  PY G   +   S+L
Sbjct: 263 DLESAEHLDTLEKKCVLWGDLAAAAESGRDFSSRFFAVHGPYAGQLASTRTSQL 316


>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical
           protein R05H10.6 protein.
          Length = 1364

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 138 KNQVESRLGDNVKGQYSL--LESDGTRRTVDYAAGAEGFN 251
           K  V+  +  + KG  SL  +E DGT R+ D+ AG+EG +
Sbjct: 760 KELVKFEMTSDEKGMSSLFGIEEDGTIRSKDWLAGSEGMH 799


>AF022971-4|AAG23982.2|  579|Caenorhabditis elegans Hypothetical
           protein C31B8.8 protein.
          Length = 579

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 368 VWESTEFSIVRESIGCGVGVRGADERSSGEQGGVLPDH 255
           +W +T+     +  G G G  G    SSG  GG  P H
Sbjct: 360 LWPTTQSPFSGDDWGSGSGSSGRGGSSSGSSGGGCPSH 397


>AB007815-1|BAA28351.1|  579|Caenorhabditis elegans matrix
           metalloproteinase protein.
          Length = 579

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 368 VWESTEFSIVRESIGCGVGVRGADERSSGEQGGVLPDH 255
           +W +T+     +  G G G  G    SSG  GG  P H
Sbjct: 360 LWPTTQSPFSGDDWGSGSGSSGRGGSSSGSSGGGCPSH 397


>AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical
           protein R08F11.7 protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 326 GCGVGVRGADERSSGEQGGVLPDHSVEPFGSGG 228
           G G G RG D   SGEQ G    +S E  G GG
Sbjct: 146 GGGGGGRGGDGGRSGEQDGRKKRNSGEQQGGGG 178


>AL031620-4|CAA20925.1|  456|Caenorhabditis elegans Hypothetical
           protein C18B12.4 protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 356 TEFSIVRESIGCGVGVRGAD 297
           ++F I  E++GCGVGV   D
Sbjct: 58  SDFIISEENLGCGVGVEPVD 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,662,580
Number of Sequences: 27780
Number of extensions: 145953
Number of successful extensions: 467
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)