Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1367
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024288-1|ABC86350.1|  562|Drosophila melanogaster IP13637p pro...    29   5.7  
AE014134-2892|AAF53639.2|  535|Drosophila melanogaster CG5681-PA...    29   5.7  

>BT024288-1|ABC86350.1|  562|Drosophila melanogaster IP13637p
           protein.
          Length = 562

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 506 SAEPVMIASFHRSNGGWLVASRIPFTGKQNLKISRRVEDAGGSLNSDQ 649
           SA+ V I+S         VA+    +G Q +KIS   E  G  LNS+Q
Sbjct: 425 SAQKVTISSIDLERKENTVAAEDETSGTQPIKISTENESGGHKLNSEQ 472


>AE014134-2892|AAF53639.2|  535|Drosophila melanogaster CG5681-PA
           protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 506 SAEPVMIASFHRSNGGWLVASRIPFTGKQNLKISRRVEDAGGSLNSDQ 649
           SA+ V I+S         VA+    +G Q +KIS   E  G  LNS+Q
Sbjct: 398 SAQKVTISSIDLERKENTVAAEDETSGTQPIKISTENESGGHKLNSEQ 445


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,926,030
Number of Sequences: 53049
Number of extensions: 498960
Number of successful extensions: 699
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)