Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1364
(377 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 30 0.69
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 29 0.92
04_04_1012 - 30104401-30104955,30105066-30106841 29 1.2
04_04_1005 - 30043698-30044252,30044363-30046138 29 1.2
03_02_0504 - 8976973-8979414 29 1.2
09_04_0030 + 13940168-13940250,13940703-13941714 29 1.6
11_06_0610 - 25449085-25453284 23 2.4
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 28 2.8
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 27 4.9
07_01_1000 - 8439183-8439824 27 4.9
11_06_0631 - 25656885-25657000,25658591-25658658,25658957-256589... 27 6.5
09_04_0524 + 18321110-18323978,18324098-18324576 27 6.5
09_02_0447 + 9452850-9454121,9454299-9454325 27 6.5
08_01_0426 - 3757110-3758405 27 6.5
06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781 27 6.5
02_01_0595 + 4420112-4420401,4420518-4420607,4421883-4421931,442... 27 6.5
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 23 6.9
12_02_0180 - 14977508-14977648,14978071-14978283 26 8.6
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 26 8.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 26 8.6
02_05_0876 - 32399066-32399920 26 8.6
02_05_0107 + 25897487-25898059 26 8.6
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 29.9 bits (64), Expect = 0.69
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 301 QANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITTL 188
Q NPPR + P P PR R P S P + + L
Sbjct: 215 QTNPPRPVRPPPPPPPPRQRLLRPLPAESPPPAALANL 252
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 29.5 bits (63), Expect = 0.92
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 295 NPPRQSKKVQPTPAPRGRTSAG 230
+PPRQ ++ Q TP+P+G AG
Sbjct: 171 SPPRQRRRRQDTPSPKGSEVAG 192
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 99 RCLQCRILHHNQPTQRTWRSQKTPLRP 19
R L+ R H+QPT+R+ R K P RP
Sbjct: 664 RRLKIRTRQHSQPTRRSERIAKQPARP 690
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 99 RCLQCRILHHNQPTQRTWRSQKTPLRP 19
R L+ R H+QPT+R+ R K P RP
Sbjct: 664 RRLKIRTRQHSQPTRRSERIAKQPARP 690
>03_02_0504 - 8976973-8979414
Length = 813
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 99 RCLQCRILHHNQPTQRTWRSQKTPLRP 19
R L+ R H+QPT+R+ R K P RP
Sbjct: 701 RRLKIRTRQHSQPTRRSERIAKQPARP 727
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 258 GVGWTFFDCRGGLACAISVDADGSAYTTTXDGAEWEEGGG 377
GVG+ CRG C + + TT +G + + GGG
Sbjct: 90 GVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGG 129
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 304 AQANPPRQSKKVQ--PTPAPRGRTSAGAPTISRPTS 203
A+ +PP K P PAP G T +P S P S
Sbjct: 614 AEKSPPTPESKASSPPPPAPEGHTP--SPPESTPPS 647
Score = 23.0 bits (47), Expect(2) = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 100 PVPTVQNSAPQPTDPE-NMEVTENSTP 23
P P ++S+P P PE +M STP
Sbjct: 685 PTPESESSSPPPPAPEGHMPSPPKSTP 711
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 292 PPRQSKKVQPTPAPRGRTSAGAPTISR 212
PP + +V+PT +P +SA A ISR
Sbjct: 50 PPSAAAEVEPTGSPSSSSSAAADMISR 76
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 56 WVGWLWCRILHCRHRN-VSVCIL 121
W GWLW R C H + S C++
Sbjct: 635 WGGWLWARWFACLHASRRSTCLV 657
>07_01_1000 - 8439183-8439824
Length = 213
Score = 27.1 bits (57), Expect = 4.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 257 CSPWSHFCWC 228
CS W FCWC
Sbjct: 12 CSSWKDFCWC 21
>11_06_0631 -
25656885-25657000,25658591-25658658,25658957-25658996,
25659742-25659820,25659918-25661707,25662030-25662037,
25662305-25662367,25662504-25662820
Length = 826
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 295 NPPRQSKKVQPTPAPRGRTSAGAPTISRPTSG 200
NPPR + PTPA S G P S +G
Sbjct: 34 NPPRLLARRPPTPADLHPASRGGPAFSCSLTG 65
>09_04_0524 + 18321110-18323978,18324098-18324576
Length = 1115
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 73 PQPTDPENMEVTENSTPAHTIPS 5
PQPT P ++ T +TPA + S
Sbjct: 1082 PQPTQPPSLPTTVTATPASPVSS 1104
>09_02_0447 + 9452850-9454121,9454299-9454325
Length = 432
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 201 PLVGRDIVGAPAEVRPRGAGVGWTFFDCRGGL 296
PL D + P G W DCRGGL
Sbjct: 107 PLAAGDSCCFALDFLPYGGRNSWELLDCRGGL 138
>08_01_0426 - 3757110-3758405
Length = 431
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 279 DCRGGLACAISVDADGSAYTTTXDGA 356
DC G AI DADG YT DG+
Sbjct: 224 DCSTGCRHAIYDDADGLFYTLRYDGS 249
>06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781
Length = 389
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 17 MGRSGVFCDLHVLWVGW 67
MG SGV LH LW+ W
Sbjct: 288 MGLSGVVPALHALWLNW 304
>02_01_0595 +
4420112-4420401,4420518-4420607,4421883-4421931,
4423337-4424020
Length = 370
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 17 MGRSGVFCDLHVLWVGW 67
MG SGV LH LW+ W
Sbjct: 272 MGLSGVVPALHALWLNW 288
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 22.6 bits (46), Expect(2) = 6.9
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = -2
Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHTIP 8
P+PT Q PT P P T P
Sbjct: 606 PLPTPQPVQASPTSPTKQHAPPAPPPVQTSP 636
Score = 22.2 bits (45), Expect(2) = 6.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 292 PPRQSKKVQPTPAPRGRTSAGAPT 221
PP +S QPTP P PT
Sbjct: 586 PPLRSPPRQPTPPPSPSQQPPLPT 609
>12_02_0180 - 14977508-14977648,14978071-14978283
Length = 117
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 3 WLGIVWAGVEFSVTSMFSGSVGCG 74
W+GI G+E + +F G +GCG
Sbjct: 81 WIGI---GIEIEIEILFLGWIGCG 101
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 38 CDLHVLWVGWLWCRILHCRHRNVS 109
C LH LW + R CRHR +S
Sbjct: 166 CRLHALWRCFFHWRSRCCRHRGLS 189
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 304 AQANPPRQSKKVQPTPAPRGRTSA 233
A AN + K+ QPTPAPR R S+
Sbjct: 851 AAANA-KAKKQQQPTPAPRSRQSS 873
>02_05_0876 - 32399066-32399920
Length = 284
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 304 AQANPPRQSKKVQPTPAPRGRTSAGAP 224
A +PPR SKK P PR +A P
Sbjct: 8 ASPSPPRSSKKRSSRPKPRAGDAARHP 34
>02_05_0107 + 25897487-25898059
Length = 190
Score = 26.2 bits (55), Expect = 8.6
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 287 WRVGLCHQRRRR 322
WR LCH+RRRR
Sbjct: 19 WRWALCHRRRRR 30
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,651,691
Number of Sequences: 37544
Number of extensions: 177363
Number of successful extensions: 911
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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