Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1364
         (377 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118694-1|AAM50554.1|  360|Drosophila melanogaster AT18267p pro...    29   1.5  
AE014298-2473|AAN09422.1|  388|Drosophila melanogaster CG32574-P...    29   1.5  
AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    28   3.5  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    28   3.5  
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    28   3.5  
AY094780-1|AAM11133.1|  924|Drosophila melanogaster LD11626p pro...    28   4.6  
AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin recog...    28   4.6  
AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-P...    28   4.6  
AE013599-441|AAF59236.1|  924|Drosophila melanogaster CG10667-PA...    28   4.6  

>AY118694-1|AAM50554.1|  360|Drosophila melanogaster AT18267p
           protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 228 APAEVRPRGAGVGWTFFDCRG-GLACAISVDADGSAYTTTXDGAEWEEGG 374
           AP  V   G G G T+    G G A   S    G+ Y+T  +GA +  GG
Sbjct: 48  APHSVSHYGGGNGATYTTGGGNGHAATYSTGGHGATYSTGGNGATYSTGG 97


>AE014298-2473|AAN09422.1|  388|Drosophila melanogaster CG32574-PA
           protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 228 APAEVRPRGAGVGWTFFDCRG-GLACAISVDADGSAYTTTXDGAEWEEGG 374
           AP  V   G G G T+    G G A   S    G+ Y+T  +GA +  GG
Sbjct: 76  APHSVSHYGGGNGATYTTGGGNGHAATYSTGGHGATYSTGGNGATYSTGG 125


>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
           PVPTV +S P+PT  +  +  + +T   T P+
Sbjct: 462 PVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPA 493


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
           PVPTV +S P+PT  +  +  + +T   T P+
Sbjct: 462 PVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPA 493


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 307  MAQANPPRQSKKVQPTPAPRGRTSAGAPTISR-PTSGITTL 188
            + QA+P   S  V+P P P  +   GAP+ S+ P+ G + L
Sbjct: 943  LPQASPHYHSGYVRPPPTPTHQFGGGAPSGSKTPSQGSSPL 983


>AY094780-1|AAM11133.1|  924|Drosophila melanogaster LD11626p
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 277 KKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           K VQ TP    R+S    T + P+ GITT
Sbjct: 484 KSVQKTPTRTRRSSTTTKTATTPSKGITT 512


>AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin
           recognition complex subunit1 protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 277 KKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           K VQ TP    R+S    T + P+ GITT
Sbjct: 484 KSVQKTPTRTRRSSTTTKTATTPSKGITT 512


>AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-PA
           protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 2   LAWYRMGRSGVFCDL 46
           LA++R GRSGVFC+L
Sbjct: 100 LAFFRGGRSGVFCNL 114


>AE013599-441|AAF59236.1|  924|Drosophila melanogaster CG10667-PA
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 277 KKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           K VQ TP    R+S    T + P+ GITT
Sbjct: 484 KSVQKTPTRTRRSSTTTKTATTPSKGITT 512


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,299,146
Number of Sequences: 53049
Number of extensions: 275109
Number of successful extensions: 1594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)