Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1362
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033257-1|AAH33257.1| 746|Homo sapiens BCL9L protein protein. 33 0.43
AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein. 33 0.43
AK122882-1|BAC85512.1| 924|Homo sapiens protein ( Homo sapiens ... 33 0.43
AK122650-1|BAC85500.1| 631|Homo sapiens (LGR7) mRNA. protein. 33 0.43
AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein. 33 0.43
D63876-1|BAA09926.1| 692|Homo sapiens KIAA0154 protein. 31 1.7
BC070044-1|AAH70044.1| 690|Homo sapiens golgi associated, gamma... 31 1.7
AF219139-1|AAF42849.1| 690|Homo sapiens GGA3 short isoform prot... 31 1.7
AF219138-1|AAF42848.1| 723|Homo sapiens GGA3 long isoform protein. 31 1.7
AF190864-1|AAF05709.1| 690|Homo sapiens ADP-ribosylation factor... 31 1.7
BC104912-1|AAI04913.1| 1236|Homo sapiens PPFIA2 protein protein. 31 2.3
AF034799-1|AAC26100.1| 1257|Homo sapiens liprin-alpha2 protein. 31 2.3
AB210009-1|BAE06091.1| 1258|Homo sapiens PPFIA2 variant protein ... 31 2.3
AF115509-1|AAD41257.1| 721|Homo sapiens LRR FLI-I interacting p... 31 3.1
Z83844-1|CAI20369.1| 639|Homo sapiens golgi associated, gamma a... 30 4.0
CR456493-1|CAG30379.1| 656|Homo sapiens GGA1 protein. 30 4.0
BC044629-1|AAH44629.1| 552|Homo sapiens golgi associated, gamma... 30 4.0
AL035496-1|CAI20951.1| 639|Homo sapiens golgi associated, gamma... 30 4.0
AK075256-1|BAC11501.1| 639|Homo sapiens protein ( Homo sapiens ... 30 4.0
AF233521-1|AAF35393.1| 639|Homo sapiens gamma-adaptin related p... 30 4.0
AF218584-1|AAF42847.1| 639|Homo sapiens GGA1 protein. 30 4.0
AF190862-1|AAF05707.1| 639|Homo sapiens ADP-ribosylation factor... 30 4.0
BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing ... 29 7.1
BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein. 29 7.1
AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein. 29 7.1
>BC033257-1|AAH33257.1| 746|Homo sapiens BCL9L protein protein.
Length = 746
Score = 33.5 bits (73), Expect = 0.43
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 42 PTILGNSLELRTPRYAPTTGILPRKIVFECVPYNAT*SLASPKSEMPDGLIS*KDSRPPK 221
P +LG+SL +R+P +P+ P VP +ASPK+ MP +S ++ +PP
Sbjct: 269 PQVLGSSLSVRSPTGSPSRLKSPSM----AVPSPGW--VASPKTAMPSPGVS-QNKQPPL 321
Query: 222 GLTTA*LVLSNRIR**LCP-----PS*APQADSRRSMMTKKQSCWPIHCKPSARPALNPW 386
+ ++ LSN + L P S AP A+ +M P P P+ NP
Sbjct: 322 NMNSS-TTLSNMEQGTLPPSGPRSSSSAPPANPPSGLMNPS---LPFTSSPDPTPSQNPL 377
Query: 387 TLCM 398
+L M
Sbjct: 378 SLMM 381
>AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein.
Length = 1494
Score = 33.5 bits (73), Expect = 0.43
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 42 PTILGNSLELRTPRYAPTTGILPRKIVFECVPYNAT*SLASPKSEMPDGLIS*KDSRPPK 221
P +LG+SL +R+P +P+ P VP +ASPK+ MP +S ++ +PP
Sbjct: 971 PQVLGSSLSVRSPTGSPSRLKSPSM----AVPSPGW--VASPKTAMPSPGVS-QNKQPPL 1023
Query: 222 GLTTA*LVLSNRIR**LCP-----PS*APQADSRRSMMTKKQSCWPIHCKPSARPALNPW 386
+ ++ LSN + L P S AP A+ +M P P P+ NP
Sbjct: 1024 NMNSS-TTLSNMEQGTLPPSGPRSSSSAPPANPPSGLMNPS---LPFTSSPDPTPSQNPL 1079
Query: 387 TLCM 398
+L M
Sbjct: 1080 SLMM 1083
>AK122882-1|BAC85512.1| 924|Homo sapiens protein ( Homo sapiens
cDNA FLJ16530 fis, clone OCBBF2021788, weakly similar
to Homo sapiens mRNA for B-cell CLL/lymphoma 9. ).
Length = 924
Score = 33.5 bits (73), Expect = 0.43
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 42 PTILGNSLELRTPRYAPTTGILPRKIVFECVPYNAT*SLASPKSEMPDGLIS*KDSRPPK 221
P +LG+SL +R+P +P+ P VP +ASPK+ MP +S ++ +PP
Sbjct: 505 PQVLGSSLSVRSPTGSPSRLKSPSM----AVPSPGW--VASPKTAMPSPGVS-QNKQPPL 557
Query: 222 GLTTA*LVLSNRIR**LCP-----PS*APQADSRRSMMTKKQSCWPIHCKPSARPALNPW 386
+ ++ LSN + L P S AP A+ +M P P P+ NP
Sbjct: 558 NMNSS-TTLSNMEQGTLPPSGPRSSSSAPPANPPSGLMNPS---LPFTSSPDPTPSQNPL 613
Query: 387 TLCM 398
+L M
Sbjct: 614 SLMM 617
>AK122650-1|BAC85500.1| 631|Homo sapiens (LGR7) mRNA. protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.43
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 42 PTILGNSLELRTPRYAPTTGILPRKIVFECVPYNAT*SLASPKSEMPDGLIS*KDSRPPK 221
P +LG+SL +R+P +P+ P VP +ASPK+ MP +S ++ +PP
Sbjct: 108 PQVLGSSLSVRSPTGSPSRLKSPSM----AVPSPGW--VASPKTAMPSPGVS-QNKQPPL 160
Query: 222 GLTTA*LVLSNRIR**LCP-----PS*APQADSRRSMMTKKQSCWPIHCKPSARPALNPW 386
+ ++ LSN + L P S AP A+ +M P P P+ NP
Sbjct: 161 NMNSS-TTLSNMEQGTLPPSGPRSSSSAPPANPPSGLMNPS---LPFTSSPDPTPSQNPL 216
Query: 387 TLCM 398
+L M
Sbjct: 217 SLMM 220
>AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein.
Length = 1499
Score = 33.5 bits (73), Expect = 0.43
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 42 PTILGNSLELRTPRYAPTTGILPRKIVFECVPYNAT*SLASPKSEMPDGLIS*KDSRPPK 221
P +LG+SL +R+P +P+ P VP +ASPK+ MP +S ++ +PP
Sbjct: 976 PQVLGSSLSVRSPTGSPSRLKSPSM----AVPSPGW--VASPKTAMPSPGVS-QNKQPPL 1028
Query: 222 GLTTA*LVLSNRIR**LCP-----PS*APQADSRRSMMTKKQSCWPIHCKPSARPALNPW 386
+ ++ LSN + L P S AP A+ +M P P P+ NP
Sbjct: 1029 NMNSS-TTLSNMEQGTLPPSGPRSSSSAPPANPPSGLMNPS---LPFTSSPDPTPSQNPL 1084
Query: 387 TLCM 398
+L M
Sbjct: 1085 SLMM 1088
>D63876-1|BAA09926.1| 692|Homo sapiens KIAA0154 protein.
Length = 692
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +2
Query: 149 VKSRIAEVRDARWSDFLEGLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSGRLTA 310
VK+++ E+ + W+ L A + +Y+ L R ++SD + T+ P P +
Sbjct: 79 VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 137
Query: 311 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
FDD+EK++LLA L+++ Q + + +V + R
Sbjct: 138 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 176
>BC070044-1|AAH70044.1| 690|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 3 protein.
Length = 690
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +2
Query: 149 VKSRIAEVRDARWSDFLEGLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSGRLTA 310
VK+++ E+ + W+ L A + +Y+ L R ++SD + T+ P P +
Sbjct: 77 VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 135
Query: 311 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
FDD+EK++LLA L+++ Q + + +V + R
Sbjct: 136 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 174
>AF219139-1|AAF42849.1| 690|Homo sapiens GGA3 short isoform
protein.
Length = 690
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +2
Query: 149 VKSRIAEVRDARWSDFLEGLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSGRLTA 310
VK+++ E+ + W+ L A + +Y+ L R ++SD + T+ P P +
Sbjct: 77 VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 135
Query: 311 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
FDD+EK++LLA L+++ Q + + +V + R
Sbjct: 136 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 174
>AF219138-1|AAF42848.1| 723|Homo sapiens GGA3 long isoform protein.
Length = 723
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +2
Query: 149 VKSRIAEVRDARWSDFLEGLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSGRLTA 310
VK+++ E+ + W+ L A + +Y+ L R ++SD + T+ P P +
Sbjct: 110 VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 168
Query: 311 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
FDD+EK++LLA L+++ Q + + +V + R
Sbjct: 169 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 207
>AF190864-1|AAF05709.1| 690|Homo sapiens ADP-ribosylation factor
binding protein GGA3 protein.
Length = 690
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +2
Query: 149 VKSRIAEVRDARWSDFLEGLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSGRLTA 310
VK+++ E+ + W+ L A + +Y+ L R ++SD + T+ P P +
Sbjct: 77 VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 135
Query: 311 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
FDD+EK++LLA L+++ Q + + +V + R
Sbjct: 136 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 174
>BC104912-1|AAI04913.1| 1236|Homo sapiens PPFIA2 protein protein.
Length = 1236
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 20 FLHRFKLSDDIRELLRAKNASIRAYDRYPTAENR--IRMRALQRDVKSRIAEVRDARWSD 193
F H L + +RE LR + A + A N+ + +R ++ ++A + S+
Sbjct: 181 FEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESE 240
Query: 194 FLEGLAPSQR 223
LEG+ P Q+
Sbjct: 241 HLEGMEPGQK 250
>AF034799-1|AAC26100.1| 1257|Homo sapiens liprin-alpha2 protein.
Length = 1257
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 20 FLHRFKLSDDIRELLRAKNASIRAYDRYPTAENR--IRMRALQRDVKSRIAEVRDARWSD 193
F H L + +RE LR + A + A N+ + +R ++ ++A + S+
Sbjct: 181 FEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESE 240
Query: 194 FLEGLAPSQR 223
LEG+ P Q+
Sbjct: 241 HLEGMEPGQK 250
>AB210009-1|BAE06091.1| 1258|Homo sapiens PPFIA2 variant protein
protein.
Length = 1258
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 20 FLHRFKLSDDIRELLRAKNASIRAYDRYPTAENR--IRMRALQRDVKSRIAEVRDARWSD 193
F H L + +RE LR + A + A N+ + +R ++ ++A + S+
Sbjct: 192 FEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESE 251
Query: 194 FLEGLAPSQR 223
LEG+ P Q+
Sbjct: 252 HLEGMEPGQK 261
>AF115509-1|AAD41257.1| 721|Homo sapiens LRR FLI-I interacting
protein 2 protein.
Length = 721
Score = 30.7 bits (66), Expect = 3.1
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 29 RFKLSDD-IRELLRAKNASIRAYDRYPTAENR-IRMRALQRDVKSRIAEVRDARWSDFLE 202
RF D+ + + R A + A R AE R IRMR L+R K D +W +
Sbjct: 16 RFSAEDEALSNIAREAEARLAA-KRAARAEARDIRMRELERQQKEYSLHSFDRKWGQIQK 74
Query: 203 GLAPSQRSYY 232
L S+R+ Y
Sbjct: 75 WLEDSERARY 84
>Z83844-1|CAI20369.1| 639|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 639
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>CR456493-1|CAG30379.1| 656|Homo sapiens GGA1 protein.
Length = 656
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 168 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 224
>BC044629-1|AAH44629.1| 552|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 552
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>AL035496-1|CAI20951.1| 639|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 639
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>AK075256-1|BAC11501.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ90775 fis, clone THYRO1001071, highly similar to
ADP-ribosylation factor binding protein GGA1. ).
Length = 639
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>AF233521-1|AAF35393.1| 639|Homo sapiens gamma-adaptin related
protein, GGA1 protein.
Length = 639
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>AF218584-1|AAF42847.1| 639|Homo sapiens GGA1 protein.
Length = 639
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>AF190862-1|AAF05707.1| 639|Homo sapiens ADP-ribosylation factor
binding protein GGA1 protein.
Length = 639
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 248 LKSDTVVTMPPLVGPSGRLTAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 427
L DT +PP P + F+D+EK+++LA L++ ++ + + E+V + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207
>BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing 1
protein.
Length = 841
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 71 KNASIRAYDRYPTAENRIRMRA-LQRDVKSRIAEVRDARWS 190
+ A++ R +N+ R A +QR VK AE+R RWS
Sbjct: 192 RRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWS 232
>BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein.
Length = 678
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 71 KNASIRAYDRYPTAENRIRMRA-LQRDVKSRIAEVRDARWS 190
+ A++ R +N+ R A +QR VK AE+R RWS
Sbjct: 30 RRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWS 70
>AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein.
Length = 813
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 71 KNASIRAYDRYPTAENRIRMRA-LQRDVKSRIAEVRDARWS 190
+ A++ R +N+ R A +QR VK AE+R RWS
Sbjct: 202 RRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWS 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,619,807
Number of Sequences: 237096
Number of extensions: 1580029
Number of successful extensions: 7499
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7496
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -