Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1354
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 35 0.011
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 34 0.026
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 33 0.045
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 32 0.079
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.079
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 32 0.10
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 0.32
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.32
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 30 0.42
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 0.74
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.98
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 0.98
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 29 0.98
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 1.3
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 28 1.7
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 27 2.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.3
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.0
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 27 3.9
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 3.9
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 5.2
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 5.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 5.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 5.2
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 26 6.9
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 26 6.9
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 9.1
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 25 9.1
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 9.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 9.1
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 9.1
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.1 bits (77), Expect = 0.011
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 452 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 631
+ SE+T + T E +E+ RE I LRS L D + VE + E + E+
Sbjct: 974 LASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKEL 1033
Query: 632 YKAIEDKMTTAADKRDENL--KKMIERLREHEEQV 730
K +ED A ++D L KK E++R ++V
Sbjct: 1034 AKQLED----AVREKDSALSFKKDYEKIRSDADRV 1064
Score = 30.3 bits (65), Expect = 0.32
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 479 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYKAIEDK 652
I+A + L A+ E +E+ E +NE R+K+ E +K + T + + + +E+K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEK 1651
Query: 653 MTTAADKRDENLKKMI 700
+ + D LKK++
Sbjct: 1652 LKENSANFDVKLKKVV 1667
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 33.9 bits (74), Expect = 0.026
Identities = 18/99 (18%), Positives = 47/99 (47%)
Frame = +2
Query: 467 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 646
T N I++ + + + HEE + ELR++++++++ E+ ++ E+Y+
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQKKT 144
Query: 647 DKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKF 763
++K+D + +L + Q +K+ +K+
Sbjct: 145 ALEIDLSEKKDA-YEYSCNKLNSYMRQTKKMTGRELDKY 182
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 33.1 bits (72), Expect = 0.045
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 485 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMT 658
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK E + T
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64
Query: 659 TAADKRDENLKKMIERLREHEEQV 730
++ + NL RL E E +V
Sbjct: 65 --QEETETNLDDEYHRLGEREPKV 86
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 32.3 bits (70), Expect = 0.079
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +2
Query: 515 ETHEEKREAYINELRSRLKD-HLEGVEKTR----LTLEQQTAEVYKAIEDKMTTAADKRD 679
ET+E ++E +N L +++D + EK+ L ++ T + K ++ ++R
Sbjct: 89 ETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLERRK 148
Query: 680 ENLKKMIERLREHEEQVRKVRAGNQEKFQQL 772
+KKM E+ E++ ++ ++KF ++
Sbjct: 149 AEMKKMSEQAELESEKMADLKNEEKKKFSKI 179
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 32.3 bits (70), Expect = 0.079
Identities = 17/91 (18%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 494 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE--DKMTTAA 667
E L K+++ ++++ INEL R+K + V + T+++ ++ E +++ A
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAF 589
Query: 668 DKRDENLKKMIERLREHEEQVRKVRAGNQEK 760
+D +L++ E + + +++ +++ + ++K
Sbjct: 590 QYKDNDLRRFHESINKLQDREKELTSNLEKK 620
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 31.9 bits (69), Expect = 0.10
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +2
Query: 452 IRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 628
I + +TN + +E L + K + K+E Y RL + +++ + +T
Sbjct: 279 INTTETNIYERYRREQLTNRKSGIPKLKKEHY-----ERLNNEKRAIQQKITQMTNETES 333
Query: 629 VYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRA 745
++A E+KM D + L + ER+R E Q+ +++
Sbjct: 334 FFQAKEEKMIETRDALNSELSEYHERIRALETQIESLKS 372
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.32
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 485 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK-AIEDKMTT 661
A K+ + +++ +EK++ + + K + EK +L +QQ A+ K A E ++
Sbjct: 637 ARKKREEQRLKREQEKKQQELERQKREEKQKQKEREK-KLKKQQQEADREKMAREQRLRE 695
Query: 662 AADKRDENLKKMIERLREHEEQVRK 736
+KR +K E+L + EE+ R+
Sbjct: 696 EEEKRILEERKRREKLDKEEEERRR 720
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.3 bits (65), Expect = 0.32
Identities = 20/91 (21%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 461 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 637
+Q VA ++A +E K E + + + SR+K + +E TR L +Q ++ +
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTR--LYKQLQDIEE 517
Query: 638 AIEDKMTTAADKRDENLKKMIERLREHEEQV 730
E+K+ + ++ ++ +++L+E+ E++
Sbjct: 518 DYENKLM----RMEQQWREDVDQLQEYVEEI 544
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 29.9 bits (64), Expect = 0.42
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 626 EVYKAIED-KMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQ 766
E+ KA+E+ K+T DENLKK I+ L E+ +K+ G QE+++
Sbjct: 35 ELVKALENVKLTKFTGDGDENLKKNIKVLVPVNEKPQKL-DGKQEEYE 81
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 29.1 bits (62), Expect = 0.74
Identities = 23/86 (26%), Positives = 44/86 (51%)
Frame = +2
Query: 515 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKK 694
E +EE + + E +++K+ +KTR + EQQT + IE+++ +K ++ LKK
Sbjct: 402 EKNEEVKS--LREKAAKVKNDCTSEKKTRQSYEQQTVK----IEEQLKFLLNK-EKKLKK 454
Query: 695 MIERLREHEEQVRKVRAGNQEKFQQL 772
IE L + + + + Q+L
Sbjct: 455 SIEALSFEKSEAENSLSSHDIDSQKL 480
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 0.98
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 197 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEE 376
A+ ETKST ++ GG A +A P +P P +P P+ E +++
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPAT 923
Query: 377 RRRS 388
R +S
Sbjct: 924 RPKS 927
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.7 bits (61), Expect = 0.98
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 545 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR 712
+N+L + L+D L G+E +RLT + + + A D + L++ +++L+
Sbjct: 494 VNDLIAELQDELRGIE-SRLTSVLSECNMLRETASEEKNAFDAESDKLERELQQLK 548
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 28.7 bits (61), Expect = 0.98
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 355 EAEGSRREET*LGS**DGRHCSEDGQDRGGVPHPQRADE*LH 480
EAE R + LG G+HCSE G P P+ LH
Sbjct: 320 EAEAKARRDKRLGELLTGKHCSECGTPLYSDPSPEELGIWLH 361
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 491 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 670
K + E +EK+ R++ + E+ + E+Q E K + ++ AA
Sbjct: 65 KRIYNGSAEAGKEKKLQKQRAQEERIRQ--KEAERLKREKERQQREQEKKLREQEKIAAK 122
Query: 671 KRDENLKKMIERLREHEEQVRK 736
K E K ER+R E+Q RK
Sbjct: 123 KMKELEKLEKERIRLQEQQRRK 144
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 584 GVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM--IERLREHEEQVRKVRAGNQE 757
G K + + + E+Y+ E+K +K D ++K IE+ ++ EQ R + + +
Sbjct: 64 GERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRNMLSKKTK 123
Query: 758 KFQQL 772
+ Q +
Sbjct: 124 RGQPI 128
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +2
Query: 506 AKMETHEEKREAYINELRSRLK---DHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 676
+++ +EK E +NE LK +HLE E + E++ E Y+ +++ + +
Sbjct: 22 SRLNLEDEKNELKLNEKGGVLKENDEHLECSESFKKLAEKE--EAYQTLKNSYNSLKQQH 79
Query: 677 DENLKKMI---ERLREHEEQVRKVRAGNQEKFQQLE 775
L K+ L E ++ + A N+++ Q+LE
Sbjct: 80 SNLLGKVSGIKSTLGERLKKDSQELAQNRKRIQELE 115
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +2
Query: 479 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEVYKAIEDKM 655
++ + +A +A++E + I R +HL G ++K LE+Q ++A + +M
Sbjct: 1675 VLTSVQARNAELEDEVSRSVDKIRRRDDRC-EHLSGKLKKLHSQLEEQHETFFRAEQQRM 1733
Query: 656 TTAADKRD--ENLKKMIERLREHEEQV 730
T ++ + +K++++L +EQ+
Sbjct: 1734 TQLGFLKETVKKQEKLLKKLNLRQEQL 1760
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 152 DAIQLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYE 268
D L+ L R + +E E ++ +C E K L YE
Sbjct: 2536 DEHDLYHGLWRRRANFLETEVATSHEQCHEWEKAQLVYE 2574
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 3.9
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 688
K +T E + I++L L V + L +Q E+ K I K + ++ E++
Sbjct: 74 KTQTFCEAEKTEISQLEQDLL-----VAQEELRKREQYDELAKPIMSKGLRSRTEQQESI 128
Query: 689 KKMIERLRE-HEEQVRKVRAGNQEK 760
K+ + +RE EE V+A N K
Sbjct: 129 GKLQDAIRELEEENANYVKAWNLRK 153
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 611 EQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQ 727
E + AE K I D+ ++K DE L+ + ERLRE EE+
Sbjct: 169 ENRRAESNK-IMDETIQKSEKIDELLQYIEERLRELEEE 206
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +2
Query: 518 THEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM 697
T E +RE + + + +++ E + +TR+ LE+Q V IED A ++ ++ +
Sbjct: 456 TSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIED---AKAKRKFSEVETL 510
Query: 698 IERLREHEEQVRKV 739
+ L E++ +
Sbjct: 511 LSSLAPLHEEIHSI 524
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 152 DAIQLFRSLCRLKVEAMEVETKSTEIRCQEM 244
DA +FRS+CRL V + K + IR Q M
Sbjct: 388 DAFLVFRSMCRLAVRQTSPD-KVSNIRSQAM 417
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 5.2
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +2
Query: 515 ETHEEKREAYINELRSRLKDHL--EGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 688
E EEK +A ++ R+ D + +EK + EQQ K +D + A D +
Sbjct: 302 EEGEEKEDA--QNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
Query: 689 KKMIERLREHEEQVRKVRAGNQEKFQQ 769
+ E+ + EE+ V A + Q
Sbjct: 360 LEDDEKDNDEEEEEEIVNAREKNLLNQ 386
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 5.2
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +2
Query: 515 ETHEEKREAYINELRSRLKDHL--EGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 688
E EEK +A ++ R+ D + +EK + EQQ K +D + A D +
Sbjct: 302 EEGEEKEDA--QNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
Query: 689 KKMIERLREHEEQVRKVRAGNQEKFQQ 769
+ E+ + EE+ V A + Q
Sbjct: 360 LEDDEKDNDEEEEEEIVNAREKNLLNQ 386
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 251 GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAE 373
G + + VI A G P+ + T S+E ++EK+ AAE
Sbjct: 151 GAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 194 PLLTDRDFETAELRPTITTDKPIINVELFAT-NTLTPIRRYSCYFKLNFKETE 39
P++ D E + K N E F + NT+T + +C+ +NF+E E
Sbjct: 923 PIIDLNDIYIDESNERVVKGKSKDNFEYFLSGNTVTRKKDNACFKMMNFEEIE 975
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 320 PEKTPSVEEIQEKLKAAEERRRSLE 394
PE TP+VE++ E L E R SL+
Sbjct: 301 PESTPAVEKVSENL--GSETRESLQ 323
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 539 AYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 679
A IN+ ++ + L G+E T LE+ +AE I+D + A K+D
Sbjct: 949 AQINDHLAQRGNMLGGIENTMDDLEEMSAEWANEIKDSL--AGTKKD 993
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 305 RRADSPEKTPSVEEIQEKLK 364
RRAD PE+TPS ++ L+
Sbjct: 21 RRADRPEETPSSSVYEQNLR 40
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 9.1
Identities = 9/44 (20%), Positives = 25/44 (56%)
Frame = +2
Query: 545 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 676
+ E + ++ +EG++ + L + +E+ ++E ++TT + R
Sbjct: 407 LKERQVAVRARIEGIKAHEMFLNNRVSEINSSLEKQLTTQKELR 450
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +2
Query: 458 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 637
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 638 AI 643
I
Sbjct: 451 EI 452
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,384,022
Number of Sequences: 5004
Number of extensions: 40769
Number of successful extensions: 222
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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