Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1354
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.8  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   4.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   5.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   7.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.3  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
 Frame = +2

Query: 524 EEKREAYINELRSRLKDHLEGV---------EKTRLTLEQQTAEVYKAIEDK 652
           E+K  + + +  S+L D LE V         E  +LTL Q+TA+ +K ++DK
Sbjct: 354 EKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTL-QETADAFKDLQDK 404


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 626 EVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEK 760
           E+ K+ +D     ADK ++ +   + R+      V   + GN+++
Sbjct: 60  EIEKSEDDSFNNQADKSEKRIPLYVCRVLHTTVWVAGAQRGNEQR 104


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 316 LTRKDSFRRRDPREAEGSRRE 378
           L   +SFR+R  REA G+ R+
Sbjct: 433 LAGDESFRKRRQREAAGNCRK 453


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 553 LVDVGLAFFLVGLHLGVERLLGGDDEVI 470
           L+D  + F  +   LG+   L  +DEV+
Sbjct: 146 LMDSDVIFVTINYRLGILGFLSTEDEVV 173


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 553 LVDVGLAFFLVGLHLGVERLLGGDDEVI 470
           L+D  + F  +   LG+   L  +DEV+
Sbjct: 17  LMDSDVIFVTINYRLGILGFLSTEDEVV 44


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 553 LVDVGLAFFLVGLHLGVERLLGGDDEVI 470
           L+D  + F  +   LG+   L  +DEV+
Sbjct: 146 LMDSDVIFVTINYRLGILGFLSTEDEVV 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,052
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)