Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1347
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 29 2.4
Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical ... 28 5.4
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 28 5.4
Z80216-9|CAH10778.1| 403|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z80216-8|CAB02284.2| 261|Caenorhabditis elegans Hypothetical pr... 27 7.2
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 58.0 bits (134), Expect = 4e-09
Identities = 38/172 (22%), Positives = 71/172 (41%)
Frame = -2
Query: 566 SNAVCKVFSLDPTLDEEMTLVRRNLLRLIGVGEFSSAAEWREPCAACVLTELTCRVCNHX 387
+NA+C+ S D T + +R N RL+ A ++ + C C+
Sbjct: 1978 ANALCRALSCDQTSQLAVEGIRDNAKRLLH-NSVVEADMTPLRSTTLFVSNVFCNSCSQA 2036
Query: 386 XXXXXXXXXXXDTERPACLCPTCGTAYDNQEIEWRLIETMNKRTMAYTLQDLICSRCHQV 207
T C TC + ++ I+ + + +N+ AY +QD C++C V
Sbjct: 2037 SNVFLSSTDEILT------CATCQSKLNSDVIDMMICDRLNQLLTAYQIQDHQCTKCKSV 2090
Query: 206 KRENLSVVCDCAGDFSLMVPVTEIKDQLMTFKTIAEYYQMPLLLEQIDFNLK 51
+ + LS+ C+C F + ++K + T +T++ L E + LK
Sbjct: 2091 RHDTLSMYCECCSQFIPQITPAQLKHEASTVETVSIVRNFALSSELATWVLK 2142
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 6/32 (18%)
Frame = -2
Query: 203 RENLSVVCDCAGDFSLM------VPVTEIKDQ 126
R++ +VC+C GDFSL+ VPVT+I D+
Sbjct: 338 RQHEGLVCECLGDFSLIRHRPTSVPVTKILDE 369
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 251 AYTLQDLICSRCHQVKRENLSVVCDCAGDFSLMVPVTEIKDQLM 120
A T + C++CHQ ENL + G F + + I + LM
Sbjct: 1202 AETTCSVKCNKCHQDSPENLQQLLSTNGIFGIRFELVSISNSLM 1245
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 251 AYTLQDLICSRCHQVKRENLSVVCDCAGDFSLMVPVTEIKDQLM 120
A T + C++CHQ ENL + G F + + I + LM
Sbjct: 1202 AETTCSVKCNKCHQDSPENLQQLLSTNGIFGIRFELVSISNSLM 1245
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 329 CPTCGTAYDNQEIEWRLIETMNKRTMAYTLQDL-ICSRCHQVKRENLSVVCD 177
C TC AY Q IE +T ++ D +CS C++ ++E+ V CD
Sbjct: 348 CATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNKPEKEDEIVFCD 399
>Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical
protein T23D5.11 protein.
Length = 349
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 347 ERPACLCPTCGT-AYDNQEIEWRLIETMNKRTMAYTLQDLICSRCHQVKRENLSV 186
ER P G AY+ I WR + ++ T+ T+Q I C Q+ E + +
Sbjct: 163 ERNITDIPVLGLIAYEGNSIRWRNVYGLSLMTLISTIQYSIILICGQIMYEGMRI 217
>AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical
protein Y42G9A.6b protein.
Length = 547
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 388 QWLHTRHVSSVSTHAAHGSRHSAALLNS 471
QW H + S+ AH SR+ +LNS
Sbjct: 482 QWTHVEEIPGCSSSLAHCSRNGTDVLNS 509
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 388 QWLHTRHVSSVSTHAAHGSRHSAALLNS 471
QW H + S+ AH SR+ +LNS
Sbjct: 619 QWTHVEEIPGCSSSLAHCSRNGTDVLNS 646
>Z80216-9|CAH10778.1| 403|Caenorhabditis elegans Hypothetical
protein F10G8.9b protein.
Length = 403
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 194 NSHVLPGDIGYI*DLAAYTPSYVCSSSRLVAILFPDYHM 310
N+H+ P DIGY+ A TP+ + V +FP+ ++
Sbjct: 278 NAHLEPKDIGYVNAHATSTPNGDSVEAEAVRQVFPEQNI 316
>Z80216-8|CAB02284.2| 261|Caenorhabditis elegans Hypothetical
protein F10G8.9a protein.
Length = 261
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 194 NSHVLPGDIGYI*DLAAYTPSYVCSSSRLVAILFPDYHM 310
N+H+ P DIGY+ A TP+ + V +FP+ ++
Sbjct: 136 NAHLEPKDIGYVNAHATSTPNGDSVEAEAVRQVFPEQNI 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,226,612
Number of Sequences: 27780
Number of extensions: 209105
Number of successful extensions: 611
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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